Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1067 ATGAATGATGGTAGACCAATGGAGCTGCATTACATGAACCCTGGTTTTCCGTACAATCCTACTGAAAGCTTCATGGAGTTCTTCGACGGATCGCCGGTGGACTATGATCACGCTGGGCCAATTCCTTATCAGGAATACTGGTCAATGAACTTGAACCCTTACAAGTATGCATTCACTGCTCCGGATAATGCATCTTACTATGGTTCTTACGAAGTAGATAATAGTTTCCCAAGACTGGAGGTCGACAGGGGAGAGTGGGAATATCCTTTAACAACGACCACTGAGGAGCCCACCACAACAGACTCTCCATCCAGAAGGGATGGAGTGAATGGCATGCAAACTATTCCTGAAGAGTCCAGCCCAAATCGCCATGATTCCAGTAGTGCTCCGGTCATATGGCAAGACAATATCGATCCAGATAATATGACTTATGAGGAACTGTTGGACTTGGGTGAGGCAGTTGGAAGTCAGAGCCGAGGTCTTTCTCAAGAACTTATTGATTTGCTCCCAACCTCGAAGTTCAAATTTGGAAGCTTATTTAAAAGAAAAAATTTTGGGAAAAGGTGCGTTATTTGTCAGATGACATATAGAAGAGGTGACCAACAAATGAAGTTACCGTGCAGGCATGTTTACCACGGTGAATGCATCACTAAATGGCTGGGCATCAACAAGAAATGCCCGGTTTGCAACGTTGAGGTATTCGGTGAGGAATCAACACATTAG 723 0.4454 MNDGRPMELHYMNPGFPYNPTESFMEFFDGSPVDYDHAGPIPYQEYWSMNLNPYKYAFTAPDNASYYGSYEVDNSFPRLEVDRGEWEYPLTTTTEEPTTTDSPSRRDGVNGMQTIPEESSPNRHDSSSAPVIWQDNIDPDNMTYEELLDLGEAVGSQSRGLSQELIDLLPTSKFKFGSLFKRKNFGKRCVICQMTYRRGDQQMKLPCRHVYHGECITKWLGINKKCPVCNVEVFGEESTH 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1067 240 MobiDBLite consensus disorder prediction 91 131 - -
Mibi01g1067 240 Pfam Ring finger domain 188 230 IPR001841 -
Mibi01g1067 240 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 236 IPR033276 GO:0004842|GO:0016567|GO:0046621
Mibi01g1067 240 SMART ring_2 189 229 IPR001841 -
Mibi01g1067 240 FunFam E3 ubiquitin ligase BIG BROTHER 151 234 - -
Mibi01g1067 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 234 IPR013083 -
Mibi01g1067 240 ProSiteProfiles Zinc finger RING-type profile. 189 230 IPR001841 -
Mibi01g1067 240 SUPERFAMILY RING/U-box 188 234 - -
Mibi01g1067 240 MobiDBLite consensus disorder prediction 88 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1067 Mibi-ChrMibi01 13996663 14000183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1067 3 240 C3H Transcription Factor Family AT3G63530 53.469 1.56e-94 275