Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1047 ATGGCTCAGAGAACGGAGAACGAAGAGACCGATTTTAAGGTCCCTGAAACCATAATCTCCTGCGTCAACAACTGCGGCGTCACCGGAAATCCTGCAACTAACAACATGTGCCAGAAGTGCTTCAACGCAACCACCTCCGCCGCCGCAGCCTCCTCGTCGTCTTCGTCTGCCGCCGGAGTTTCAGCGCCTTCTAAATTTGTCGATGACAAGTCTTCTTCTAGATCTACCGTTTCTCGGTCTCCTAAGAGGTCCTTTCCTTGCGATGAGCCTGCGCAGACGACAGATCGGGAGAAGACGGACGAGGCGGCGCCGTCTGAAGCTAAGCGCGTGGTGAATCGGTGCTCCGGTTGCCGGAGGAAGGTCGGTTTGACCGGTTTCCGGTGCCGGTGTGGAGAGTTGTTCTGTTCTGAGCATAGGTACTCCGATCGTCATGATTGTAGCTACGACTACAAAGCCGCCGGACGTGAAGCCATCGCTAGGGAAAATCCGGTGGTTAAAGCCGCCAAGATCGTTAAAGTTTGA 522 0.546 MAQRTENEETDFKVPETIISCVNNCGVTGNPATNNMCQKCFNATTSAAAASSSSSSAAGVSAPSKFVDDKSSSRSTVSRSPKRSFPCDEPAQTTDREKTDEAAPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1047 173 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Mibi01g1047 173 Gene3D - 1 64 - -
Mibi01g1047 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Mibi01g1047 173 Pfam AN1-like Zinc finger 114 151 IPR000058 GO:0008270
Mibi01g1047 173 MobiDBLite consensus disorder prediction 89 104 - -
Mibi01g1047 173 FunFam Zinc finger AN1-type containing 6 88 169 - -
Mibi01g1047 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 57 - -
Mibi01g1047 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Mibi01g1047 173 MobiDBLite consensus disorder prediction 51 104 - -
Mibi01g1047 173 Gene3D - 87 169 IPR035896 -
Mibi01g1047 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 172 - -
Mibi01g1047 173 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Mibi01g1047 173 MobiDBLite consensus disorder prediction 51 82 - -
Mibi01g1047 173 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 85 - -
Mibi01g1047 173 Pfam A20-like zinc finger 20 42 IPR002653 GO:0003677|GO:0008270
Mibi01g1047 173 SUPERFAMILY AN1-like Zinc finger 95 167 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1047 Mibi-ChrMibi01 13783891 13784412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1047 8 173 C2H2 Transcription Factor Family AT3G52800 37.791 5.13e-32 111