Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1042 ATGAAGCTGCAGAAGCAGAACCAGAAGCAGAGGCAGACGACCAGAACCAGAAACAGAAACGAGATCGGTGGCCGACGACAAGAAGGAGCAGATCAGCGGTCTTGCAACAACGATAGAGTAGCAAATCAAAGGAGGAAGACGACGGATCAGCTGTTCGAAGACGCCGCCGTCACTGAGCCCCTTGCATGCGAGCTGCCGATGTGGGTGAGAAGGCAAGCTGCAGAAGAAGCAGAGGAAGAAGCGGCAGCAGAAATGGCTCCTCCCAAGCAGAGAACACCAAGGGTGAGCAGAAACCCAGAATTGATAAGAGGGATTGGGAAGTATTCGAGGTCTAAGATGTACCACAAGAGGGGTCTCTGGGCTATCAAGGCCAAACATGGCGGCGTCTTCCCTCGTCACGATGCTAAGCCTAAGCCTGAAGCTCCTGCTGAGAAGCCTCCCAAGTTTTATCCCGCCGACGATGTTAAGAAGCCCTTGGTCAACAAGCACAAGCCTAAGCCCACTAAGCTCAGGGCTAGCATCACTCCCGGTACCGTGCTGATTCTTCTTGCTGGAAGATTCAAGGGAAAGAGAGTAGTTTTCCTGAAGCAGCTTCCATCTGGATTGCTTCTTGTAACTGGTCCATTTAAGATCAATGGAGTTCCTTTGAGACGTGTTAGCCAATCTTATGTCATTGGAACCTCCACAAAGGTTGATGTTTCTGGAGTAAATGTTGAGAAATTTGATGACAAGTACTTCGCCAAGAAGACTGAGAAGAAGAAGAAAAAGGGAGAAGGAGAGTTTTTTGAGGCCGAGAAAGAGGAGAAAAATGTGATCCCCCAAGAGAAAAAGGATGACCAGAAAACCGTGGATTCTGCCTTGTTAAAAGCCATCGAGAGTGTCCCAGAGTTGAAGGCTTATTTGGGTGCTAGGTTTTCTCTCAAGGCTGGCATGAAGCCACATGAACTAGTCTTCTAA 957 0.489 MKLQKQNQKQRQTTRTRNRNEIGGRRQEGADQRSCNNDRVANQRRKTTDQLFEDAAVTEPLACELPMWVRRQAAEEAEEEAAAEMAPPKQRTPRVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKHGGVFPRHDAKPKPEAPAEKPPKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKVDVSGVNVEKFDDKYFAKKTEKKKKKGEGEFFEAEKEEKNVIPQEKKDDQKTVDSALLKAIESVPELKAYLGARFSLKAGMKPHELVF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1042 318 Pfam Ribosomal protein L6e 211 318 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mibi01g1042 318 PANTHER 60S RIBOSOMAL PROTEIN L6 89 318 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mibi01g1042 318 SUPERFAMILY Translation proteins SH3-like domain 172 261 IPR008991 -
Mibi01g1042 318 MobiDBLite consensus disorder prediction 133 169 - -
Mibi01g1042 318 Gene3D - 172 256 IPR014722 -
Mibi01g1042 318 Pfam Ribosomal protein L6, N-terminal domain 88 146 IPR005568 GO:0003735|GO:0005840|GO:0006412
Mibi01g1042 318 CDD KOW_RPL6 166 318 IPR041997 -
Mibi01g1042 318 MobiDBLite consensus disorder prediction 133 161 - -
Mibi01g1042 318 MobiDBLite consensus disorder prediction 1 52 - -
Mibi01g1042 318 MobiDBLite consensus disorder prediction 14 52 - -
Mibi01g1042 318 FunFam 60S ribosomal protein L6 172 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1042 Mibi-ChrMibi01 13745510 13751308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1042 87 318 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 83.621 3.55e-127 361