Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1028 ATGTGGAGATTTAAGCCATTCACACATAAAGAGCAGGCTGGGCTTGAAGGACGCACTATAGATGTTAGCAATCTTAAAATAAATGTTCAAAAGGCCATCGCTGAAGGGGGGTTCTCTTGTGTCTACTTGGCTCGTGATGCTGCACACATGTCAAAACAGTTTGCTTTGAAGCACATTATATGCAATGATGAAGAATCCCTTGAATTGGTCAAGAAGGAGATCTCAGTGATGAAGTCATTGAAAGGGCATCCTAATATTGTTACACTTTATGCACATGCAATTTTTGATATGGGCAGGACAAAAGAGGCATTCCTTGTGATGGAATTCTGTGAGAAGTCTCTGGTGCAGGTGCTGGAGAGCCGGGGAGCAGGGTATTTTGAGGAGCAACAGGTTTTATTGATCTTCAGGGGTATATGTAATGCAGTTTTTGCAATGCACTGCCAATCCCCACCTATTGCTCACAGAGACTTAAAAGCTGAAAATCTTCTATTAGGTTTAGATGGCTTGTGGAAACTGTGTGACTTCGGAAGCACAACCACCAAGCACAAGCGTTTTGATAAACCAGAAGAAATGGGGATTGAAGAAGATAATATCAGAAAGTACACTACTCCTGCCTATAGGGCCCCTGAGATGTGGGATCTGTTTCTGAGGGAAGTCATTAATGAAAAAGTGGACATATGGGCTCTTGGGTGTCTTCTCTTTCGCATATGCTACTTCAGGAATGCATTTGATGGAGAGTCCAAGCTTCAAGTCCTTAATGGAAACTATCGCATCCCTGATACACCTAAATACAATTCATCTGTTGTAGACTTAATCAGAGACATGCTTCAAGCTAGACCGGATGACAGACCCGATATCACGCAGGTCTGGTTTCGTGTTAATGAGCAGTTACCTACTAATCTGCAGAAGTCATTACCTGATTCACCACCTGAATTTTCTTCTTCCAACAATCATGAAGGTACTTCAAAGCCTGCTAACAGATCAACCCCAGTGCCTCGTAGGAGTCCTCCCCCACCATCTGGAGAACCTAAAACTTCATCACCGTCATCCATCTCTTCTAGGGGAGGTGGGGGCCAGCTTGGTTCTTTCTGGTCCACTCAGCATGCACAAAATCCAATTGCCACAGAAGGACAGGGCAAACACATATTTGAAGTAGAACCAGCTAGCCCTATGTCATCAAATCTTGATAGAACTCGCCTTGTGAATAATCAATTGCCTAACAATGTTAGCCCTAACAAAGTGGTCAATGCTCATTCCCAAACTTTGAAAAGCAGTTCACAAGGAAAATCAAGCAAGCCTGATACTGGTTCTTCCAAGGACTTGGAAATAAAATTTTTTCAGGGTCAAGATCATAATAGTGAGAAGCGAGTGTCATCAAGTATAGAAGACACAACTCCTTTTCAAGACCAAACATTTAACGCCTTTGTTGCTGAATTTGATACTAGTAAATTCAATTCTGGACCCAGTTATAAATCTGATAGGGAAGCAGCATTAGGGTCTGAGATGGAAAAACTCAAGAAGCAGCTGAAGGAAGTTAAATTGGAAAAAGCTGAAATAACTTTCAAGTATGAAAAGCTCACTGCCATCTGCCGATCTCAAAGACAAGAACTCCAAGATCTCAAGCAGGCACTTACAGCAAAAACCCCATCGTCAAATAAGGAGGCTTTTAGAACAGCTTCAACGGTTGCAACACCTACTCCTATGAGATGTGGCACTGATCAGGGACAAGTGCAAAACAAAGCTGAATGGAAAACTCCTGGTTCAGAACCTAAGTCATCATGGCAAGCTTTTCCAGAAGAACCCCTGCCCCAGAGGACTGTTTTGGCGGACAAAACTTCCAAGTCTTCTGGGAGTAGGAGTGGTCAGCAAAACAATCAGCCTGCCCAGCCAACTACTAGCCTTAATTCTCGGGCGTTTGGAACTGAAAGCTTTTCTACTATCCATATTGGAAGCCCACAAGTGTCTAGGCATACTACTGATGGGAGTAATTCTCAGGCAAAGTCAGCTTCTCAACCTGCTGGATGGGCTGGTTTTTAA 2037 0.4315 MWRFKPFTHKEQAGLEGRTIDVSNLKINVQKAIAEGGFSCVYLARDAAHMSKQFALKHIICNDEESLELVKKEISVMKSLKGHPNIVTLYAHAIFDMGRTKEAFLVMEFCEKSLVQVLESRGAGYFEEQQVLLIFRGICNAVFAMHCQSPPIAHRDLKAENLLLGLDGLWKLCDFGSTTTKHKRFDKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFRNAFDGESKLQVLNGNYRIPDTPKYNSSVVDLIRDMLQARPDDRPDITQVWFRVNEQLPTNLQKSLPDSPPEFSSSNNHEGTSKPANRSTPVPRRSPPPPSGEPKTSSPSSISSRGGGGQLGSFWSTQHAQNPIATEGQGKHIFEVEPASPMSSNLDRTRLVNNQLPNNVSPNKVVNAHSQTLKSSSQGKSSKPDTGSSKDLEIKFFQGQDHNSEKRVSSSIEDTTPFQDQTFNAFVAEFDTSKFNSGPSYKSDREAALGSEMEKLKKQLKEVKLEKAEITFKYEKLTAICRSQRQELQDLKQALTAKTPSSNKEAFRTASTVATPTPMRCGTDQGQVQNKAEWKTPGSEPKSSWQAFPEEPLPQRTVLADKTSKSSGSRSGQQNNQPAQPTTSLNSRAFGTESFSTIHIGSPQVSRHTTDGSNSQAKSASQPAGWAGF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1028 678 MobiDBLite consensus disorder prediction 418 439 - -
Mibi01g1028 678 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Mibi01g1028 678 Coils Coil 495 543 - -
Mibi01g1028 678 PANTHER SERINE/THREONINE PROTEIN KINASE 1 671 - -
Mibi01g1028 678 MobiDBLite consensus disorder prediction 418 434 - -
Mibi01g1028 678 Gene3D Transferase(Phosphotransferase) domain 1 10 307 - -
Mibi01g1028 678 CDD STKc_GAK_like 26 298 - -
Mibi01g1028 678 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1028 678 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1028 678 MobiDBLite consensus disorder prediction 300 364 - -
Mibi01g1028 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Mibi01g1028 678 MobiDBLite consensus disorder prediction 300 329 - -
Mibi01g1028 678 MobiDBLite consensus disorder prediction 544 592 - -
Mibi01g1028 678 MobiDBLite consensus disorder prediction 608 671 - -
Mibi01g1028 678 MobiDBLite consensus disorder prediction 544 678 - -
Mibi01g1028 678 SUPERFAMILY Protein kinase-like (PK-like) 28 341 IPR011009 -
Mibi01g1028 678 MobiDBLite consensus disorder prediction 345 364 - -
Mibi01g1028 678 MobiDBLite consensus disorder prediction 330 344 - -
Mibi01g1028 678 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1028 Mibi-ChrMibi01 13550424 13553685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1028 26 292 CBL-interacting serine-threonine protein kinases AT5G45810 28.873 7.47e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Mibi01g1028 Pkinase 3.6e-40 CL0016