Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1012 ATGGAGCTTGGTTTGAGCTTGGGAGATCATGCTTCAAAGCCTTCTGAAGGTTCCAGCCTTCTGGGATTAGGCCTCACCACTTTATCCATTGGCCCTTTCATCAATACAAAAGCATCAAATCATCAACAAGAAGAAGAAAAGCCAGAGGAAAAAGAAGCAAAAAGGCTAAAGGGAAAGCAGAGTATTGAAGAAAACGAAGATAGAGTTGAACATGTTCAGCTTGATCTTCTCCCTCACACTCCTGTCGCTGTTTCTCGCACTAACCCACCTTCCCAAATCTCATTCCCATGGCCTCCTTCTGAAAATGGAAGCTCTTCTAGGGGCGTGGATATGAATAGATTACCGCCGCCTCCTCTGATGGCGGCTGAGGAAGATGAGGCGGCGATGTCGTCATCTCCAAACAGTGCTGGATCGTCTTTTCAGATGGATCTAAGTGTGTTTAACAGAGGAGGGAGTAGTCTTAGTGGTTGTAAAAGGGATTATGAGGGAGATATGTATTATGATCAAAGGGCTGGTTCTTCAAGAGCAAGCGATGAAGATGACAACGTTGGTAGTACGAGGAAGAAGCTAAGATTGTCCAAGGAACAATCTGCTTTTCTAGAAGAGAGCTTCAAAGAACACAGCACCCTCAACCCAAAACAAAAAATTGCTCTTGCAAAACAGCTCAATCTTCGCCCTCGACAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAGGTAGATTGTGAGTACTTGAAGAGGTGTTGTGAGACATTAACGGAAGAGAACAGAAGGCTTCACAAAGAGCTTCAAGAACTAAGAGCTTTGAAGACCAATTCAAACCCTTTCTTCATGCAATTACCTGCCACCACTTTGACCATGTGTCCCTCTTGTGAGCGAGTCGCCACCAACAATTCTTCCACCGCCACCGCCACCATCGCCGCCGGTGTTTCCTCTGCAAGTCCTTCTATTGAACCTTCTACATCATCCAAAGCCATTGGATTCCCTCTAAGCAAACCAAAGTTCTATCCTTTTGCTCACACCAAAACCCACCATCACCCATCTACACCCTCTTGA 1077 0.4559 MELGLSLGDHASKPSEGSSLLGLGLTTLSIGPFINTKASNHQQEEEKPEEKEAKRLKGKQSIEENEDRVEHVQLDLLPHTPVAVSRTNPPSQISFPWPPSENGSSSRGVDMNRLPPPPLMAAEEDEAAMSSSPNSAGSSFQMDLSVFNRGGSSLSGCKRDYEGDMYYDQRAGSSRASDEDDNVGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTNSNPFFMQLPATTLTMCPSCERVATNNSSTATATIAAGVSSASPSIEPSTSSKAIGFPLSKPKFYPFAHTKTHHHPSTPS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1012 358 Gene3D - 191 241 - -
Mibi01g1012 358 Coils Coil 256 279 - -
Mibi01g1012 358 FunFam Homeobox-leucine zipper protein 18 173 248 - -
Mibi01g1012 358 CDD bZIP 236 275 - -
Mibi01g1012 358 ProSitePatterns 'Homeobox' domain signature. 218 241 IPR017970 GO:0000981|GO:0006355
Mibi01g1012 358 MobiDBLite consensus disorder prediction 173 190 - -
Mibi01g1012 358 SMART halz 243 287 IPR003106 GO:0006355|GO:0043565
Mibi01g1012 358 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g1012 358 Pfam Homeodomain 187 241 IPR001356 GO:0003677
Mibi01g1012 358 SUPERFAMILY Homeodomain-like 171 244 IPR009057 -
Mibi01g1012 358 MobiDBLite consensus disorder prediction 168 190 - -
Mibi01g1012 358 MobiDBLite consensus disorder prediction 34 119 - -
Mibi01g1012 358 MobiDBLite consensus disorder prediction 84 109 - -
Mibi01g1012 358 CDD homeodomain 187 244 IPR001356 GO:0003677
Mibi01g1012 358 SMART HOX_1 185 247 IPR001356 GO:0003677
Mibi01g1012 358 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 48 314 - -
Mibi01g1012 358 Pfam Homeobox associated leucine zipper 243 277 IPR003106 GO:0006355|GO:0043565
Mibi01g1012 358 MobiDBLite consensus disorder prediction 40 74 - -
Mibi01g1012 358 ProSiteProfiles 'Homeobox' domain profile. 183 243 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1012 Mibi-ChrMibi01 13444720 13446113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1012 170 347 Homeobox Transcription Factor Family AT4G37790 61.326 1.07e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi01g1012 Homeodomain 1.1e-15 CL0123