Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0991 ATGGCTTTTCTCCTTAACCCCAGCTTCTGCCGCCACCTGCTATTAATTTCCCTGTACTTCCTTTCTTCTTCCATCATCAATTCACTTTCCAGTACCGTTTCCATTTCTGGAACTTCCAACCACACATTAATCTGTGCCTTGCAGAGTACCAACCGGTTCCTCAATTGCACCAGTTTCCCCACTGGCATTCAAATTCAAGTGAATGCCAACATTTCCTTTTCTGAGATTGCAGGAGGAAATGGGTTCATCTGTGCATTGAGGCCACCAATGGGTTCCCCTTCCCCTTCTCCTTCTTCTGTCATTTTTTGTTGGAGATTCTCTGCCAATGCAACAAATGTTGTTCCCAAGAGAATATACAATGGGACAGTGATTCAGAATTTGGAAGCAGGAAGCTCTCAGTTTTGTGGCCTTTCAAGCCACAACAATGGGCTTAAGTGCTGGCAATGGCCTGGGTTCAACACAAGTAATGAGAACAGATTCTCGAGCATATCTGCGGGAGAGAATTTCGTTTGTGGGTTATTGGAAACATCTGGGAATATTTATTGCCAAGGAAATATTGGTGGTAAACCCATGGGGAATTACTCAATGATTGCTGCAGGGAGGAGACATGCTTGTGCTATCTACTCCACCAATGGAAGCTTACATTGTTGGGGTGACGAGCCAGGAGCCACAATGAGGCCTCAAGGGAAATTCGTCTCTTTGGCTTTGGGAGATAATCGGAGTTGCGCTTTGAGGGCTGTGAACGAAACAATTCAGTGTTGGGGGACGGATGGTTTCAGCATGCCAGAGAGCTTGAAAAACGAATCTTTCTTGTCCATCACAGCTAAAGGAAGTGTTTTCTGTGGTGTAATATCTAGAAATTATTCTTTGTATTGTTGGGGAAATGATAATTTGGGGGTGAATGGGACTGCTCAACTGGTGTTTGATAATGTCCTACCAGGTCCTTGTAGAACTGAATGTCCAAGTGGAACATTGCCAGGTTCTGCACGGTTTTGTGGTCCGGGTCAAAGATCTATTTGCAGCTCTTGTGGTGGAAGCCAACTACCAATACCTGAATCCCCACCACCACCTCCTCCACCGGCACCTTCACAATCAAGGCAAAGTGATTGGAGCAGCAAAATGGTGGCATTTCTAGTGGTTGGCTGTGTTGGTTCACTTTCTTTGATCCTAATCTTGGCATTCTTCCTCTACAAGTATTGCAAAGGCCGAGGATGCAAGCGTGTCCACGACTCCGGCCGGTTGGACGATGAGCCGGAAGATCAACCCGAAATCCGACCAGCTTTAGAGAAGAGACTGAGCCATATCATCAGCATGGGAAATGGAGGCCACTTGGAGGAATTCTCATGGCAAACACTATTGGAAGCAACCAACAATTTCTCAGAAGAACAAAAAATAGGAACAGGCAGTTTTGGTTCGGTGTACCATGCCACACTCAATGATGGCAGAGAAGTGGCCATCAAAAGAGCAGAAACCTCACCCACCTCCCCATCATACAAAATCCTAGGAGTCTCCAAGCGTCAAGAAGACAAAGACAATGCCTTTGTCAACGAACTAGAATCCCTATCCAGACTCAACCACAAGAATCTAGTAAGATTACTAGGTTTCTTTGAAGACAACAATGAAAGAATCCTAGTCTATGAGTTCATGACCAATGGTAGCCTAACCGACCACCTTCACAAATTCCAAACCCCAACCTCAAATTCCCCTCTAATGTCATGGTCAGGACGCATCCAAATAGCCTTAGACGCAGCAAGAGGCATAGAATACCTACACGAGTATGCAATCCCACCAATCATTCATCGTGACATCAAATCAGCAAACATACTATTAGACGCAAAATGGACAGCAAAAGTTTCAGACTTTGGACTATCACTAATGGGTCCAGAGGATGAAAAATCTCACCTTTCTCTTCTAGCGGCAGGGACAGTGGGGTACATGGATCCAGAGTACTACAGGCTGCAACATCTGACAACTAAGAGTGATGTGTACAGTTTTGGGGTTGTGTTGCTAGAAATGCTATGTGGGTATAAAGCGATACATAGGAATGAGAATGGGACGCCGAGGAATGTGGTGGATTTTGTGGTGCCGTACATAGTACAGGATGAGATACATAGGGTGTTGGATCGGAGGCTGGCGCCGCCGACGCCGTATGAGATAGAGGCGGTGGCGTTTGTGGGGTATTTGGCGGCGGACTGTGTGAGGTTGGAAGGGAGAGAAAGGCCAACAATGGTGGATGTTGTTAATAAGTTGGAAGCAGCATTGGATGCTTGTTTAGCACAGCCTAAACCAACACTCTCTAGATTTAACTCTGCTTCTGATTCTGATTAA 2328 0.4575 MAFLLNPSFCRHLLLISLYFLSSSIINSLSSTVSISGTSNHTLICALQSTNRFLNCTSFPTGIQIQVNANISFSEIAGGNGFICALRPPMGSPSPSPSSVIFCWRFSANATNVVPKRIYNGTVIQNLEAGSSQFCGLSSHNNGLKCWQWPGFNTSNENRFSSISAGENFVCGLLETSGNIYCQGNIGGKPMGNYSMIAAGRRHACAIYSTNGSLHCWGDEPGATMRPQGKFVSLALGDNRSCALRAVNETIQCWGTDGFSMPESLKNESFLSITAKGSVFCGVISRNYSLYCWGNDNLGVNGTAQLVFDNVLPGPCRTECPSGTLPGSARFCGPGQRSICSSCGGSQLPIPESPPPPPPPAPSQSRQSDWSSKMVAFLVVGCVGSLSLILILAFFLYKYCKGRGCKRVHDSGRLDDEPEDQPEIRPALEKRLSHIISMGNGGHLEEFSWQTLLEATNNFSEEQKIGTGSFGSVYHATLNDGREVAIKRAETSPTSPSYKILGVSKRQEDKDNAFVNELESLSRLNHKNLVRLLGFFEDNNERILVYEFMTNGSLTDHLHKFQTPTSNSPLMSWSGRIQIALDAARGIEYLHEYAIPPIIHRDIKSANILLDAKWTAKVSDFGLSLMGPEDEKSHLSLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLEMLCGYKAIHRNENGTPRNVVDFVVPYIVQDEIHRVLDRRLAPPTPYEIEAVAFVGYLAADCVRLEGRERPTMVDVVNKLEAALDACLAQPKPTLSRFNSASDSD 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0991 775 Gene3D - 22 185 IPR009091 -
Mibi01g0991 775 SMART serkin_6 459 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0991 775 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 192 760 IPR044815 GO:0004674
Mibi01g0991 775 MobiDBLite consensus disorder prediction 349 364 - -
Mibi01g0991 775 Gene3D - 186 319 IPR009091 -
Mibi01g0991 775 CDD STKc_IRAK 465 751 - -
Mibi01g0991 775 Gene3D Transferase(Phosphotransferase) domain 1 549 762 - -
Mibi01g0991 775 Pfam Regulator of chromosome condensation (RCC1) repeat 197 220 - -
Mibi01g0991 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Mibi01g0991 775 ProSitePatterns Protein kinases ATP-binding region signature. 465 487 IPR017441 GO:0005524
Mibi01g0991 775 FunFam Serine/threonine-protein kinase-like protein CCR4 549 768 - -
Mibi01g0991 775 Pfam Protein kinase domain 459 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0991 775 Gene3D Phosphorylase Kinase; domain 1 433 548 - -
Mibi01g0991 775 MobiDBLite consensus disorder prediction 343 367 - -
Mibi01g0991 775 SUPERFAMILY Protein kinase-like (PK-like) 436 750 IPR011009 -
Mibi01g0991 775 SUPERFAMILY RCC1/BLIP-II 101 305 IPR009091 -
Mibi01g0991 775 ProSiteProfiles Protein kinase domain profile. 459 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0991 Mibi-ChrMibi01 13290279 13292606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0991 31 770 Receptor kinase-like Gene Family AT5G47850 52.988 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mibi01g0991 Pkinase 2.5e-45 CL0016