Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi01g0977 | ATGACAAATGTGAATGTAAGATTGGCAGGCCAAGATGTGAAGCATGTCACTTTGCTGTCTGAATGGTTATGTAACAGTAAGGTTTCACTTTTTGGGTCTGGGAATGTTATTGATGCTTTTCTTTTTTTCTTCTCGCTTTCTTGTCATCAGGGAACTCCAGTGAACATAATTGTTGGATCACATGTCTGGGTTGAGGATCCTGAGATTGCTTGGACTGATGGTGAGGTCACAGAAATCAATGGCAGCGACGCCACCATCCTTACCACAGATGGAAAAACTATTGTTGCAAGCGTTTCTAGTATATATCCTAAAGATACAGAGGCACCACCAGCTGGAGTTGATGATATGACCAAGTTAGCTTACCTTCATGAGCCAGGAGTACTGAATAACCTTTCCATCCGTTTCTCTCTCAATGAGATATATGGGTATAAGCAGACATATACAGGGAATATCTTGATAGCAGTAAATCCTTTCCGGAGGCTGCCACACTTGTATGATATACATATGATGGAGCAGTATAAAGGAGCAGCTTTTGGAGAGCTAAGTCCTCACCTTTTTGCTGTTGCAGATACTTGTTACAGGGCAATGATTAATGATAATGGAAGCCAGTCCATTTTGGTGAGTGGAGAGAGTGGTGCTGGTAAAACAGAGACAACAAAGATGCTAATGAGATATCTAGCTTTCATGGGGGGTAGATCTAATACCGAAGGAAGAACAGTAGAACAGCAGGTTTTAGAGTCCAATCCAGTATTGGAAGCATTTGGTAATGCCAAAACTGTCAAAAATAACAATTCAAGTCGTTTTGGTAAATTTGTTGAAATACAATTTGACAAAAATGGGAAGATTTCCGGGGCTGCTATACGTACTTACCTCCTAGAAAGGTCACGCGTTTGCCAAGTTTCTGACCCAGAGAGGAACTATCACTGCTTTTACATGCTTTGTGCAGCACCACCAGAGGATTTCAAAAAGTACAAGTTGGGGGATCCAAGGAAATTTCATTACCTTAATCAATCAAACTGCTATGAAGTAACAAATGTGGATGATGCAAAGGAATATCTGGAGACCAGAAATGCAATGGATATTGTAGGCATCAGCCAGGATGAGCAGGATGCTATTTTCCGTGTGGTAGCAGCAATCCTCCATCTTGGAAACATTGATTTCATCAAAGGGAAGGAAGTTGATTCTTCCAAATTAAAGGATGACAAATCAACATTCCACCTTCACACTGCTGCAGAACTGCTCATGTGTGATGAGAAAGCATTAGAAGACTCACTTTGCAAGCGTGTCATTGTTACTCCTGATGGTAACATCACGAAACCACTTGACCCTGACTCGGCTGCTTTAAGTCGAGATGCTTTGGCGAAGACTGTGTACTCTAGGTTGTTTGATTGGATTGTGGATAAGATAAACAGTTCCATTGGACAAGATCCTACTGCAACAAGCTTAATAGGAGTGCTTGATATTTATGGATTTGAAAGCTTCAAAATCAACAGTTTTGAACAACTATGTATCAACCTGACAAATGAGAAGTTGCAACAACATTTTAACCAGCACGTATTTAAGATGGAGCAAGAAGAATACACAAAGGAGGAAATCAACTGGAGCTACGTAGAATTTGTGGATAATCAAGATGTTCTGGATCTTATCGAAAAGAAACCTGGGGGAATCATTGCTCTGCTTGATGAAGCTTGCATGTTCCCCAAATCAACCCATGAAACATTTGCTCAAAAGTTATATCAGACGTATAAAGCACACAAGCGCTTCAGCAAGCCCAAACTTGCTCGGACAGATTTCACAATTAACCATTATGCTGGAGATGTCACATACCAAGCAGATCAGTTTCTTGATAAGAACAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTAAATGCCTCCAAGTGCTCATTTGTTGCAAATCTTTTCCCTCCATTACCTGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATCGGTACACGGTTCAAGCAACAATTACAATCTCTAATGGAGACATTGAACACAACAGAACCACACTACATCAGATGTGTTAAACCAAATACAGTGTTGCAACCTGGAATATTTGAGAACTTCAATGTCTTAAACCAGTTAAGATGCGGGGGAGTACTCGAGGCGATTCGGATTAGTTGTGCTGGATATCCAACAAAGCGAACATTTGATGAGTTCCTTGAACGTTTTGGAATGCTGGCCCCTGATGTCCTAGATGGATCAGATGAGAAAACAGCATGTGTTGCTATATGTGATAAGATGGGATTAAAAGGCTATCAAATGGGAAAAACGAAGGTATTTCTGAGAGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCTGAAGTCTTAGCCAGAGCTGCTAGATGCATACAGAGACAAATACGAACACATTTGACCAGAAAAGAGTTCCTCACCCTGAGAAAGGCCACAATTCATATCCAAAAATTATGGAGAGCAAAACTTTCACGTAAACTTTATGAGCAAATGAGGAGGGAAGCAGCTTCTATCCGCATACAGAAACATGCACGTGCACACACAGCAAGAATGCATTATACATCATTGCAAGCATCAGCAATAGTTATCCAGTCAGGGTTAAGAGCAATGGCAGCACGAAATGAATACCGGTACAGACGAAGAACAAAGGCTGCAATCAAAGTTCAGACACAATGGAGAAGAGTCTATGCCTTTTCTGCTTATAAAAAGCTGAAAAAGGCAACTATTTCTCTTCAATGTCTCTGGAGAGCCAAAGTGGCTAGGAAGGAGCTCAGAAAGCTAAGGATGGCTGCAAGGGAAACAGGAGCACTTAAGGAGGCGAAGGACAAATTGGAGAAGCGTGTTGAAGAGCTGACATGGCGACTAGATATTGAAAAGCACTTGAGGATTGATCTTGAGGAATCTAAAGGGCAAGAAATTGCAAAGCTACAGAATGCTTTACAAGAAATGCAAAGTCAGCTTGATGAAGCCCATGCTGCAATTATACAAGAAAAGGAAGCGGCTAAACTAGCAATTGAATCTGCACCACCAGTCATCAAAGAGGTACCTGTCGTGGACAATACCAAGCTTGAGCTACTCACAAGTAAAAATGTGGAGCTAGAGGGTGAAGTAGAAGAGTTGAAGAAGAAGATTGAAGAGTTTGAGGTGAAGTGTTCAGACATGGAGAAAGAGTCTCAAGAAAGGCTGAAAGAGGCTGAAGAAGCACATTTGAAAGCAACACAACTTCAGGAGACTATTGAAAGATTAGAGTCGAATTTGTCAAACCTTGAGTCTGAGAATCAAGTTCTACGCCAACAGGCTTTGGTTGAATCCAAAAACGAAGAACTCTCCGAGGAGCTTAAGACCCTCAAGGAAAAGATTGAAAATCTAGAATCAGAGAATGAAATTCTTCGGAGCCGCCCAGTGGCTACTGTGGTGCAAAAGGTTTATCCAGAAAAAATAGAAAAAGAAGAACAGGAAACAGCCATTAGAGAGAAAATTCAACAGAATGATATTTCAGATACGGTGACTTCACAAGTCAAGAGTTTGGACAATGGAATCCTCACAGCTGAAGAACACCAAACCAGAAAAGAACCCAGACAACCAGTGTCCCTCCTCATAAGACAAAGATCACTCACAGACAGGCAGCAGGAAAGTCATGATGCACTGCTCAAGTGTCTTGCAGAGGATAAGAGATTTGAGAAAAACAGGCCAGTTGCTGCTTGTGTTATCTATAAAGCTCTTCTTCAATGGAGATCTTTTGAAGCAGAGAAGACGCATATATTTGACAAGATTATTCACACAGTCCGATCATCCATTGAGCAGAGTCAAGAAGGAATCAATGACTTAGCATATTGGCTCTCTACAACTTCAACATTATTGTTTTTCCTACAAAGCACACTCAAGGCCAGCAACTCAAATAAGGCAGCATCTCGTAGTAATCGAAACTCCCCCGCTACTTTATTTGGCAGAATGGCACAAGGGTTGCTTTCATCCTCTATGGGCATGGGGGTATCAAGTGGCTACAGTGGACTGGTGGGGAAGCCAAATGAGCAATCAAAAGTGGAAGCAAAATATCCAGCTATTCTGTTCAAGCAACATTTAACTGCATATGTTGAGAAGATATATGGAATGATCCGTGACAGTTTAAAGAAAGAGATCAGTCCATTCCTAAATTTGTGCATTCAGGCACCCAGATCTATGAGGACTAAATCCGTGCGTGGATCTTCAAGGAACATTCACTTAAATATAGTTGCAAAACAACAGGCATCAAATATGCACTGGAAAAGCATTGTCAATAAGTTAGATGATACGTTGGCCATATTGTCTGACAACTATGTTCCTTCCATGATTACAAGGAAGATTTTTAGTCAGGTGTTCTCTTTCATGAATGTCCAGCTTTTCAATAGTTTGTTGCTTCGCCGTGAGTGCTGCTCCTTTAGCAATGGAGAGTATTTAAAGGCAGGTTTGCATGAGTTGGAACAGTGGTGTACCAAGGCAACTGATCTGTTTGCTGGATCTTCCTGGGATGAACTCAAACACATACGCCAAGCTGTGGGCTTTTTGGTCTCGCATCAAAAGACACAAAAATCTCTGGATGAGATAACAAGTGAACTATGTCCGGTGTTAAGTATCCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAATATGGAGCACAGGGGTTATCTCAAGAAGTAATTAGCCGAATGAGAGTGCTTGTGGCAGAAGACTCCATAAACATACCCAATAACTCCTTCCTTCTGGAGGTGGATTCCAGTATACCTTTCTCAATGGAGGAGATGTTCCGTTCCATGAGTGACATTCGCTTATCAGACATTGACGTGGATCCACCCACAGTCCTAAGGCAAAGATCAGACTTCCAATTCTTATTGCAGCAAATGGATGGCGAATCTCATTGA | 4914 | 0.4133 | MTNVNVRLAGQDVKHVTLLSEWLCNSKVSLFGSGNVIDAFLFFFSLSCHQGTPVNIIVGSHVWVEDPEIAWTDGEVTEINGSDATILTTDGKTIVASVSSIYPKDTEAPPAGVDDMTKLAYLHEPGVLNNLSIRFSLNEIYGYKQTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINDNGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDFKKYKLGDPRKFHYLNQSNCYEVTNVDDAKEYLETRNAMDIVGISQDEQDAIFRVVAAILHLGNIDFIKGKEVDSSKLKDDKSTFHLHTAAELLMCDEKALEDSLCKRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPTATSLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASKCSFVANLFPPLPEETSKQSKFSSIGTRFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLERFGMLAPDVLDGSDEKTACVAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLARAARCIQRQIRTHLTRKEFLTLRKATIHIQKLWRAKLSRKLYEQMRREAASIRIQKHARAHTARMHYTSLQASAIVIQSGLRAMAARNEYRYRRRTKAAIKVQTQWRRVYAFSAYKKLKKATISLQCLWRAKVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHLRIDLEESKGQEIAKLQNALQEMQSQLDEAHAAIIQEKEAAKLAIESAPPVIKEVPVVDNTKLELLTSKNVELEGEVEELKKKIEEFEVKCSDMEKESQERLKEAEEAHLKATQLQETIERLESNLSNLESENQVLRQQALVESKNEELSEELKTLKEKIENLESENEILRSRPVATVVQKVYPEKIEKEEQETAIREKIQQNDISDTVTSQVKSLDNGILTAEEHQTRKEPRQPVSLLIRQRSLTDRQQESHDALLKCLAEDKRFEKNRPVAACVIYKALLQWRSFEAEKTHIFDKIIHTVRSSIEQSQEGINDLAYWLSTTSTLLFFLQSTLKASNSNKAASRSNRNSPATLFGRMAQGLLSSSMGMGVSSGYSGLVGKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSMRTKSVRGSSRNIHLNIVAKQQASNMHWKSIVNKLDDTLAILSDNYVPSMITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELEQWCTKATDLFAGSSWDELKHIRQAVGFLVSHQKTQKSLDEITSELCPVLSIPQIYRIGTMFWDDKYGAQGLSQEVISRMRVLVAEDSINIPNNSFLLEVDSSIPFSMEEMFRSMSDIRLSDIDVDPPTVLRQRSDFQFLLQQMDGESH | 1637 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi01g0977 | 1637 | CDD | MYSc_Myo11 | 125 | 772 | IPR036018 | - | |
| Mibi01g0977 | 1637 | CDD | MyosinXI_CBD | 1209 | 1597 | IPR037975 | GO:0007015 | |
| Mibi01g0977 | 1637 | ProSiteProfiles | IQ motif profile. | 906 | 935 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | ProSiteProfiles | IQ motif profile. | 835 | 861 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | FunFam | Myosin heavy chain | 305 | 360 | - | - | |
| Mibi01g0977 | 1637 | SMART | DIL_2 | 1449 | 1556 | IPR002710 | - | |
| Mibi01g0977 | 1637 | Gene3D | Kinesin motor domain | 114 | 715 | IPR036961 | - | |
| Mibi01g0977 | 1637 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 365 | 654 | - | - | |
| Mibi01g0977 | 1637 | ProSiteProfiles | IQ motif profile. | 858 | 887 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | Gene3D | - | 785 | 837 | - | - | |
| Mibi01g0977 | 1637 | Gene3D | - | 885 | 934 | - | - | |
| Mibi01g0977 | 1637 | Gene3D | - | 838 | 884 | - | - | |
| Mibi01g0977 | 1637 | Gene3D | - | 305 | 363 | - | - | |
| Mibi01g0977 | 1637 | Coils | Coil | 929 | 963 | - | - | |
| Mibi01g0977 | 1637 | FunFam | Myosin 2 | 365 | 482 | - | - | |
| Mibi01g0977 | 1637 | FunFam | unconventional myosin-Va | 886 | 933 | - | - | |
| Mibi01g0977 | 1637 | ProSiteProfiles | IQ motif profile. | 787 | 814 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | Pfam | Myosin head (motor domain) | 113 | 772 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | PANTHER | MYOSIN | 103 | 1562 | - | - | |
| Mibi01g0977 | 1637 | FunFam | unconventional myosin-Va | 838 | 885 | - | - | |
| Mibi01g0977 | 1637 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 838 | 935 | IPR027417 | - | |
| Mibi01g0977 | 1637 | ProSiteProfiles | IQ motif profile. | 883 | 912 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | ProSiteProfiles | IQ motif profile. | 810 | 839 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | Gene3D | - | 720 | 782 | - | - | |
| Mibi01g0977 | 1637 | ProSiteProfiles | Dilute domain profile. | 1258 | 1574 | IPR002710 | - | |
| Mibi01g0977 | 1637 | SMART | MYSc_2a | 105 | 785 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | Coils | Coil | 1025 | 1135 | - | - | |
| Mibi01g0977 | 1637 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 57 | 106 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | ProSiteProfiles | Myosin motor domain profile. | 111 | 784 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | FunFam | unconventional myosin-Va | 789 | 837 | - | - | |
| Mibi01g0977 | 1637 | Pfam | Myosin N-terminal SH3-like domain | 58 | 98 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | Pfam | IQ calmodulin-binding motif | 789 | 807 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | Pfam | IQ calmodulin-binding motif | 811 | 830 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | Pfam | IQ calmodulin-binding motif | 860 | 879 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | Pfam | IQ calmodulin-binding motif | 837 | 855 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | Pfam | IQ calmodulin-binding motif | 908 | 927 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | Coils | Coil | 968 | 1002 | - | - | |
| Mibi01g0977 | 1637 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | PRINTS | Myosin heavy chain signature | 145 | 164 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | PRINTS | Myosin heavy chain signature | 249 | 276 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | PRINTS | Myosin heavy chain signature | 202 | 227 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | PRINTS | Myosin heavy chain signature | 535 | 563 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi01g0977 | 1637 | Gene3D | - | 492 | 676 | - | - | |
| Mibi01g0977 | 1637 | FunFam | Class V myosin | 492 | 641 | - | - | |
| Mibi01g0977 | 1637 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 84 | 838 | IPR027417 | - | |
| Mibi01g0977 | 1637 | Pfam | DIL domain | 1450 | 1553 | IPR002710 | - | |
| Mibi01g0977 | 1637 | SMART | iq_5 | 905 | 927 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | SMART | iq_5 | 786 | 808 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | SMART | iq_5 | 882 | 904 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | SMART | iq_5 | 809 | 831 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | SMART | iq_5 | 834 | 856 | IPR000048 | GO:0005515 | |
| Mibi01g0977 | 1637 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi01g0977 | Mibi-ChrMibi01 | 13149383 | 13160316 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi01g0977 | 169 | 1632 | Myosins gene family | AT2G31900 | 75.221 | 0.0 | 2295 |