Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0975 ATGGAAGGAAGTGGACAAATAGCAGTGCCTCCTGGGTTTAGGTTCCATCCTACAGATGAGGAGCTTCTTTACTATTATCTCCGCAAGAAAGTCTCTTTTGAAGCCATTGACCTTGATGTCATCCGCGAAGTTGATCTCAACAAACTCGAGCCTTGGGATCTCAAAGAAAAATGTAGGATTGGATCTGGACCTCAGAATGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACCGGGACCCGAACAAACCGGGCCACCATGGCTGGGTTTTGGAAAGCAACGGGGAGGGACAAAGCCATATACATGAGCAATTCAAAGAGGATAGGGATGAGGAAAACCCTAGTTTTCTACACTGGACGTGCTCCTCACGGCCAAAAAACTGACTGGATCATGCATGAGTACCGCTTAGACCAAGACGATGCTGATCAGCTTCAGGAAGATGGGTGGGTGGTGTGCAGGGTATTCACGAAGAAGAACTTAAACAGAGGATTTCAAGCAGAAATGGAAGAAGAAGAGCAGATAATGAGCCACCACCACATGGCGTCAACAATTACCACTGCTTCTAATAATAATTTCATGAAGTTATTGAGCCCAGAATCAGCAGTAGTACCACCCCTTCCATCTTCAACCTCTTCCTCGTCGTCCACGTCAACCACTATAAACCCCATGGACGTTCTTCACTGTTCTCACAGCTTACTTAGGCTTGCTTCTTCATCAACTTCTTCTATTCCTCCAGGAGGGCTTTTTAGTAATCTCATGCACCAACAAGGTGGTGACCATCACAGAGTACTCAACACTAATAATGGAGACTGGTCCTTCTTGGATAAGCTATTAGCTTCACAACAACAACATGGACCTGTGGTTCCTCCTCTTGGGGCTTCTCCTCCTCCTCCTCCTTCGCCCCACAAGTTCCCTTTTCACTACCTTGCTTGTGATCAGAGTGACATCATGAAGTAA 963 0.4652 MEGSGQIAVPPGFRFHPTDEELLYYYLRKKVSFEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAIYMSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDQDDADQLQEDGWVVCRVFTKKNLNRGFQAEMEEEEQIMSHHHMASTITTASNNNFMKLLSPESAVVPPLPSSTSSSSSTSTTINPMDVLHCSHSLLRLASSSTSSIPPGGLFSNLMHQQGGDHHRVLNTNNGDWSFLDKLLASQQQHGPVVPPLGASPPPPPSPHKFPFHYLACDQSDIMK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0975 320 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 216 - -
Mibi01g0975 320 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Mibi01g0975 320 FunFam NAC domain-containing protein 18 163 - -
Mibi01g0975 320 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Mibi01g0975 320 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Mibi01g0975 320 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0975 Mibi-ChrMibi01 13128231 13131242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0975 1 282 NAC Transcription Factor Family AT1G79580 53.231 1.77e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g0975 NAM 6.9e-38 No_clan