Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0970 ATGTCACAAATGAACGATCTTGTGTTTGGAGGAGAAATTTATAGCGACACGTTAAACAATGAAGCAAGCATGAAGGCGCAGATGAACCGCAGTTTGTCAGAAGAACCTCTCAAAATATACCATGTTACTCATAGTAATGCCAAATCAGCAAAAGCTTCATTGAGTCATTCCCAATTGGTAAATGAAGCCAGAAAAAATTCCGAATCAACTCAATATTCAGCTAGTACTATATGTATACCTGGGAAACCTGAATACAAGTTTGCTTCTGATCCTTCAACCTCACCAAGCAATGCAAAGGCATTGCCAACAAATGCAAAGACAAATAGTCATCCTCAAATGGTAAAGAAAGCTGGGAAAAATTCTGAATCAACTGAATACTCAATGTGTACTATATCTAAACCTGAAAAACCTGAAGGCACGTTTGCTTCTAATCCTTCAATCTCACCGGGAAATGCAACGGCATTGCCAACAAATGCAAAAGCAAATAGTCATGGCCAAGGGAGTTGCAATATCTCTCCTAGCAATAGTTTAGATGGCACTAGTCCACCAATTAAGCCACATACCGGTGGTGATGCGCGATGGGATGCAATTCAAATGGTCTCTAGGGGAACTACTCTTAATCTTGGCCATTTTCGGGTTCTCAAGCGCATCGGATACGGGGATATTGGAAGTGTACATCTTGTGGAACTTAAAAGAACTAGGACATACTTTGCCATGAAGGTAATGGATAAAGCATCTCTGGCTAGCAGAAATAAGTTATTGAGAGCACAAACAGAAAGGGAGATTCTTCGGCTTCTTGACCATCCATTCTTACCCACTTTATATGCCTACTTCGAAACTGAGAAGTACTACTGTTTGGTCATGGAGTTCTGTGGTGGAGGCGATCTTCATTCCCTTCGACAAAAGCAACCTAACAAGCATTTTACTGAAGAAGCTGCAAGGTTTTATGTCTCGGAGATTCTGTTAGCTCTAGAGTACCTACACATGTTAGGCATTGTGTACAGGGACTTGAAGCCAGAGAACGTCCTAGTTAGAGATGAAGGGCATATCATGTTGTCAGATTTCGATTTATCACTTCGGTGCTCGGTCAATCCAACACTTGTCAAATCTTCATTTACTCATGTAAGTAACAATGGTTGTGGGAGCATTTTAGAGGATGACAATGCAGTGCAGGGTGTTGTTCAGCTTCAGCAACAGACTTTCTTCCCGCGTATTTTACCTTTGAAGAAGACTCGAAAATCAAAATCCGACTTTGGTCCAGCGATTGGAAGTCCGCTCCCAGAATTAGTGGCAGAGCCAAAAAATGTGAGATCAATGTCATTTGTAGGGACACATGAATATCTTGCTCCTGAGATCATCCGAGGGGAGGGACATGGCAGCGCGGTAGATTGGTGGACATTCGGGATCTTCTTGTATGAGCTCTTGCACGGGACAACTCCCTTTAAGGGAACAGGGAATCGTGACACGCTTGTCAATGTCATTGGTCAGCCATTGAAGTTCCCTGAAGCTCCCCATGTAAGTTCTGCAGCAAGGGATTTAATAAAAGGGTTGTTGGTGAAGGAACCTAAGAAGAGAATTGCATATACAAGAGGAGCAACAGAGATTAAGCAACACCCTTTTTTTGAAGGAATGAATTGGGCTCTAGTAAGAAGTGCCTTGCCTCCACATGTACCAGACCCTGTAGATTTTACTCAGTATGCTTCCAAAGAAGCAAAGATCCCAAAGGACAAGAGGATGATAGAAATAGCAAAAGATCAAAACAAACATTGTGCTGATGATTCGTACATAAATTTTGAGTATTTTTAG 1806 0.4186 MSQMNDLVFGGEIYSDTLNNEASMKAQMNRSLSEEPLKIYHVTHSNAKSAKASLSHSQLVNEARKNSESTQYSASTICIPGKPEYKFASDPSTSPSNAKALPTNAKTNSHPQMVKKAGKNSESTEYSMCTISKPEKPEGTFASNPSISPGNATALPTNAKANSHGQGSCNISPSNSLDGTSPPIKPHTGGDARWDAIQMVSRGTTLNLGHFRVLKRIGYGDIGSVHLVELKRTRTYFAMKVMDKASLASRNKLLRAQTEREILRLLDHPFLPTLYAYFETEKYYCLVMEFCGGGDLHSLRQKQPNKHFTEEAARFYVSEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSFTHVSNNGCGSILEDDNAVQGVVQLQQQTFFPRILPLKKTRKSKSDFGPAIGSPLPELVAEPKNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGTGNRDTLVNVIGQPLKFPEAPHVSSAARDLIKGLLVKEPKKRIAYTRGATEIKQHPFFEGMNWALVRSALPPHVPDPVDFTQYASKEAKIPKDKRMIEIAKDQNKHCADDSYINFEYF 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0970 601 MobiDBLite consensus disorder prediction 87 189 - -
Mibi01g0970 601 FunFam Serine/threonine-protein kinase AGC1-7 434 559 - -
Mibi01g0970 601 SMART serkin_6 211 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0970 601 MobiDBLite consensus disorder prediction 89 130 - -
Mibi01g0970 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 332 344 IPR008271 GO:0004672|GO:0006468
Mibi01g0970 601 ProSiteProfiles Protein kinase domain profile. 211 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0970 601 Gene3D Phosphorylase Kinase; domain 1 209 294 - -
Mibi01g0970 601 Gene3D Transferase(Phosphotransferase) domain 1 435 559 - -
Mibi01g0970 601 Gene3D Transferase(Phosphotransferase) domain 1 295 364 - -
Mibi01g0970 601 SUPERFAMILY Protein kinase-like (PK-like) 201 564 IPR011009 -
Mibi01g0970 601 CDD STKc_phototropin_like 210 562 - -
Mibi01g0970 601 Pfam Protein kinase domain 435 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0970 601 Pfam Protein kinase domain 212 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0970 601 PANTHER FLIPPASE KINASE 1-RELATED 41 570 - -
Mibi01g0970 601 FunFam Serine/threonine-protein kinase D6PK-like 209 294 - -
Mibi01g0970 601 FunFam serine/threonine-protein kinase D6PK-like 295 362 - -
Mibi01g0970 601 MobiDBLite consensus disorder prediction 137 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0970 Mibi-ChrMibi01 13046887 13050871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0970 180 601 AGC Kinase Gene Family AT1G79250 70.721 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi01g0970 Pkinase 1.7e-37 CL0016