Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0964 ATGTCTCTTTTCCAGAATCTGTTGAATCAGAGTAACTTGTTCGAGCCTTATCGAGTCTTTCTCAATGAAAATTCAGACACCCAGATGGATTGGAAGGAGACCCGAGAAGCCCACATTTTCGAAATCGATCTTCCTGGTCTTACCAAAGAGGATGTGAAGCTCGAAGTTCATGAAAACAGAGTCCTTTGCATCAGCGCAGAGAGAAAAGAAGAAGAAGAAGGTGACAATGAGGGAAAAAAGAGCCTCAGATGGCACTGTAAGGAGAGAGAAACCATTGGAACCATCTCGAGGAAATTCAGGTTACCTGAGAATGCGAAGGTTGAAGAAATTAAGGCCTCAATGAGCGATGGAGTGTTGAAAATTACAGTGCCTAAGGATGAGACCAAAAAGAAGCACAAGCAGCAGAAGAAGGAGATTGATATTTCTGGAGACGATGATGGGGCTGCACGTAAAGGGATCGGTCGTTTTATAAGTTATGTTAATTATCCTCCAATCCTTGCTGAACATTTGATGGCCGAAGTGAAAGTTAGAGTACTGCAAGCTAGCACATCAATTGACTGCAAAAACATGAGGCTCCACTATGTTTCTGTGATTTTGCTTCTGGTCACTACTTGTTGTTTAGAAGCAGAGGCAAATGTGACTAAGAAACCAGTGAATCCCTTACCACTGCCTGAAGCATTACTTTCCAATGATCATTATCATACAACATGCCCTGATGCTGAAGCCATTATCAACCAGAAAGTCACAGCTTGGTTTGAAAAGGACCCCACCTTGGCTCCCGCCATTATCCGCCTTCACTTCCATGACTGCGCCGTTAGGGGATGCGATGCATCAATTCTGCTTAATAATGCAAATAGTGAGAGGGCAGCTTATGAGAGCAGAACTCTAAGAGGATTCCAAGTGATAGATGACATCAAAGCAGAGTTAGAGAGAAGATGCCCTAAAACTGTGTCTTGTGCAGACATTCTCACTGCTGCTGCAAGAGATGCCACCATTTTAGCAGGAGGGCCATTCTGGGAAGTCCCATTTGGCCGTAAAGATGGAAGAATCTCCATATCCAGAGAAGCCAGCTTGGTCCCTCAAGGCCATGAAAACATCACAGCCCTTCTTAACCTTTTCACTGAACTTGGCTTAGACATACTTGACTTGGTCTCTCTCTCTGGTGCTCACACTATAGGAAGAAGCACATGTTTCTCCTTCATGAATAGGGTTTATAACTTCAATGGGACTGGAAAACCTGACCCTTCATTGAACATATATTACCTAGAAATTCTCAAGAGAAGATGCAAAAGAGAGATGGATTTGGTGCACCTGGATGTGATAAGTCCAAGGACTTTTGACAATGTTTATTACACAAATCTCGTAAGGAAAGTGGGTTTGTTGTCTACAGATCAGTTATTGTATTCAGATTCAAGGACTGGTCCTTTCGTGGAAGCATTTGCAACTCAACCTTTCCTTTTTAGTAGCCAATTTGCAGCTTCCATGGTGAAGCTTGGGAATGTTCATGTATTGAGCAGGCCGTATGAAGGTGAAATCAGAACCAACTGCAACTATGTCAATCCTGTTTGA 1569 0.4302 MSLFQNLLNQSNLFEPYRVFLNENSDTQMDWKETREAHIFEIDLPGLTKEDVKLEVHENRVLCISAERKEEEEGDNEGKKSLRWHCKERETIGTISRKFRLPENAKVEEIKASMSDGVLKITVPKDETKKKHKQQKKEIDISGDDDGAARKGIGRFISYVNYPPILAEHLMAEVKVRVLQASTSIDCKNMRLHYVSVILLLVTTCCLEAEANVTKKPVNPLPLPEALLSNDHYHTTCPDAEAIINQKVTAWFEKDPTLAPAIIRLHFHDCAVRGCDASILLNNANSERAAYESRTLRGFQVIDDIKAELERRCPKTVSCADILTAAARDATILAGGPFWEVPFGRKDGRISISREASLVPQGHENITALLNLFTELGLDILDLVSLSGAHTIGRSTCFSFMNRVYNFNGTGKPDPSLNIYYLEILKRRCKREMDLVHLDVISPRTFDNVYYTNLVRKVGLLSTDQLLYSDSRTGPFVEAFATQPFLFSSQFAASMVKLGNVHVLSRPYEGEIRTNCNYVNPV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0964 522 CDD secretory_peroxidase 228 519 IPR033905 GO:0004601|GO:0042744
Mibi01g0964 522 Gene3D - 2 143 IPR008978 -
Mibi01g0964 522 Gene3D - 231 520 - -
Mibi01g0964 522 SUPERFAMILY HSP20-like chaperones 21 133 IPR008978 -
Mibi01g0964 522 SUPERFAMILY Heme-dependent peroxidases 229 521 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 20 142 IPR002068 -
Mibi01g0964 522 PRINTS Haem peroxidase superfamily signature 382 397 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Haem peroxidase superfamily signature 439 454 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Haem peroxidase superfamily signature 335 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Haem peroxidase superfamily signature 317 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Haem peroxidase superfamily signature 259 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 ProSitePatterns Peroxidases active site signature. 259 270 IPR019794 GO:0004601
Mibi01g0964 522 Gene3D Peroxidase, domain 2 360 498 - -
Mibi01g0964 522 PANTHER - 198 520 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 Pfam Hsp20/alpha crystallin family 30 142 IPR002068 -
Mibi01g0964 522 ProSitePatterns Peroxidases proximal heme-ligand signature. 382 392 IPR019793 -
Mibi01g0964 522 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Plant peroxidase signature 316 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Plant peroxidase signature 493 506 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Plant peroxidase signature 261 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Plant peroxidase signature 335 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Plant peroxidase signature 437 452 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Plant peroxidase signature 237 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Plant peroxidase signature 381 393 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 PRINTS Plant peroxidase signature 453 470 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 FunFam Peroxidase 231 371 - -
Mibi01g0964 522 FunFam Peroxidase 360 498 - -
Mibi01g0964 522 Pfam Peroxidase 245 482 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g0964 522 CDD ACD_ScHsp26_like 28 125 - -
Mibi01g0964 522 ProSiteProfiles Plant heme peroxidase family profile. 227 520 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0964 Mibi-ChrMibi01 12962473 12965437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0964 221 520 Peroxidase AT1G30870 50.000 1.21e-101 308