Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0957 ATGGCACCGATGAGTCTCCCACCTGGGTTTAGGTTCCACCCAACAGATGAAGAACTCGTTGCTTACTATTTGGAAAGAAAAATCACAGGCCGTTCCATAGAGCTTGAAATTATCCCTGAAGTTGATCTCTACAAATGCGAACCATGGGATTTGCCAGAGAAGTCTTTCTTGCCAAGTAAGGATATGGAGTGGTACTTCTACAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAACAGAGCAACAAAAGCTGGATACTGGAAAGCCACTGGGAAAGATAGGGCAGTTCACTCTCAGAAACGCCAAGTAGGGATGAAGAAGACTTTGGTTTATTACAGAGGAAGAGCACCACATGGCATTAGAACCAACTGGGTCATGCATGAGTATCGTCTCACTCAATCAATTCCTCCTACTTCCTCTTGCTCCTTGAAGGATTCTTATTCATTGTGTCGTGTCTTCAAGAAGACGATCCAAATCCCAAAACCAAAAGACGATCAGGAGGAAGAGGAAACAGAAATGGATGCTAAGAATAAGGGATCAAAGTCTGACATGTGGTTCGCAGAAGAACAAGGTCTAAGAGAAGAATCAAGTGGCTTCGAGGTTTCTAGAGAAATGGAAACTGCAGATGAGAAAACTATGGTCAATAATAATAATAATCATGATGGTGACAATTCTAACAGTAAATTTCATTGTGATAATGCTTCATCTTCGGATCTCACTCAAGGGACCCCCATTGACCAAAATGGGATAGCAGATAATAATGATTTTCAGGCCCAATTCGCATCTGATGAAGCAAATAGTGCAGCTAATCCGTACTCCCTTGGAATTGACTACTCATCAAGTCTATTTCAGGAAATGGAGCAACAAATGTATACTGGCATGCACTATCAACTTGCATATCCACCATTGGAGCTTGAGGATTTCCCTCAAACAAGTTTTGCAGAGACAAAGCCATTAATGAAGCCAGCAGAGGAACAAATGATGAATAATAATGATTATCGCATGGCGTATGATCACAAATACAAGAGCGGTGGTTCACTGAGTGGGACTCTAGAAGAGATCATCTCCTTGTGTTCTTCCTCTCATCAAGACAATAACTCTGTGCCTCTCTCTATGTTAGATTATAATACCTACTAA 1143 0.4129 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELEIIPEVDLYKCEPWDLPEKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATKAGYWKATGKDRAVHSQKRQVGMKKTLVYYRGRAPHGIRTNWVMHEYRLTQSIPPTSSCSLKDSYSLCRVFKKTIQIPKPKDDQEEEETEMDAKNKGSKSDMWFAEEQGLREESSGFEVSREMETADEKTMVNNNNNHDGDNSNSKFHCDNASSSDLTQGTPIDQNGIADNNDFQAQFASDEANSAANPYSLGIDYSSSLFQEMEQQMYTGMHYQLAYPPLELEDFPQTSFAETKPLMKPAEEQMMNNNDYRMAYDHKYKSGGSLSGTLEEIISLCSSSHQDNNSVPLSMLDYNTY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0957 380 MobiDBLite consensus disorder prediction 162 185 - -
Mibi01g0957 380 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mibi01g0957 380 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Mibi01g0957 380 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 234 - -
Mibi01g0957 380 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Mibi01g0957 380 MobiDBLite consensus disorder prediction 216 241 - -
Mibi01g0957 380 FunFam Nac domain-containing protein 86 15 160 - -
Mibi01g0957 380 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0957 Mibi-ChrMibi01 12856370 12860652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0957 1 358 NAC Transcription Factor Family AT1G54330 50.276 2.70e-102 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g0957 NAM 6.7e-40 No_clan