Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0956 ATGGGGCATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGTCTGTGGTCTCCTGAAGAAGATGACAAGCTCCTCAAATTCATTACCTCTAATGGCCACAAAAGTTGGAGTTCTGTTCCTAAACTTGCAGGGTTGCAGAGATGTGGGAAGAGTTGCAGATTGAGGTGGATAAACTATTTGAGACCTGACCTTAAGAGAGGTTCTTTCACTGCCGATGAAGAACAAACCATTATTGACGTTCATCGAATTCTCGGAAATAGATGGGCTCAAATAGCGAAGCATCTACCGGGAAGAACAGACAATGAGGTGAAGAATTTCTGGAATTCATGCATTAAGAAGAAACTCATTTCTCAAGGCTTCGACCCTCAGACTCACAATCTTCTCTCTTCTCATAGACGACCCTCTCTTTCTTCTGTTTCATCCTCTGCCACTAGCAAACATAACAATAATGAATCCACTTTCAGACTCATTCATGAACCTGATCATCATCATCATTTGAATCTTCAACCTTCTACCTCTCCTGTCTTCTCCATTCAATACCAACAACCTAATTCAACCACCGCTACTAGTTATAAACTCCATGAATCTCATCATAATTTCCTCTTTGAATCATCATCATCCATTATTAATGGGAATATTAATCCTGATGCGCCAAAGAACAATAATGATTGCTTGTCTTCACTCGTTGGGTTTCCTGAGAATATTAGCAATAGATCACCATATGATATTGCTGAAACTGATAAGATCTTTAGATCAGCTCAGGCATTGATGGAAGGAGAAACTACTGAAGTACAGTTAGAACCAGAAAAGGACAAGAAGAGTAGTGATAATATTGAACGAGTCATAATAGAGGAAGACAATTATAATAATAGTAATTGTTTGGAGGGGTCAAGTATTAACAGTAACTTTGATTTTGGGTTGTTGGAAGGTGTACTTAACTCTGAATATATGTCTTATGACGTTCTCTCTTCCATGGATGACCTTGCATGGAACTTTTAG 999 0.3894 MGHRCCSKQKIKRGLWSPEEDDKLLKFITSNGHKSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTADEEQTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGFDPQTHNLLSSHRRPSLSSVSSSATSKHNNNESTFRLIHEPDHHHHLNLQPSTSPVFSIQYQQPNSTTATSYKLHESHHNFLFESSSSIINGNINPDAPKNNNDCLSSLVGFPENISNRSPYDIAETDKIFRSAQALMEGETTEVQLEPEKDKKSSDNIERVIIEEDNYNNSNCLEGSSINSNFDFGLLEGVLNSEYMSYDVLSSMDDLAWNF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0956 332 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mibi01g0956 332 SMART sant 65 113 IPR001005 -
Mibi01g0956 332 SMART sant 12 62 IPR001005 -
Mibi01g0956 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Mibi01g0956 332 FunFam Transcription factor MYB86 67 143 - -
Mibi01g0956 332 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Mibi01g0956 332 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mibi01g0956 332 Gene3D - 10 66 - -
Mibi01g0956 332 Gene3D - 68 151 - -
Mibi01g0956 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Mibi01g0956 332 MobiDBLite consensus disorder prediction 126 149 - -
Mibi01g0956 332 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mibi01g0956 332 CDD SANT 16 60 IPR001005 -
Mibi01g0956 332 PANTHER MYB DOMAIN PROTEIN 55 1 285 - -
Mibi01g0956 332 CDD SANT 68 108 IPR001005 -
Mibi01g0956 332 FunFam MYB transcription factor 10 66 - -
Mibi01g0956 332 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0956 Mibi-ChrMibi01 12849908 12852401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0956 1 133 MYB Transcription Factor Family AT3G12720 84.211 3.17e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0956 Myb_DNA-binding 4.9e-13 CL0123