Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0943 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAACTATGAATTCCCATGACAGACCAATGTGTGTTCAAGGTGATTCAGGCCTTGTCCTCACAACCGACCCTAAGCCTCGTCTTCGTTGGACCGTCGAACTCCATGAACGCTTCGTCGATGCCGTCACTCAGCTCGGTGGCCCTGATAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCATCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAACCCCACAAGGAATTCAATGATCACTCGATTAAGGATAGCATGAGAGCTTCGGCTTTAAATCTTCAACGAAACACTGCTTCCCCATCCGCCATGATTGGTCATCATCACAACATGAATGAGATGCAAATGGAGGTGCAGAGGAGACTGCATGAACAGCTTGAGGTCCAGAAACACCTTCAGCTAAGAATTGAAGCGCAAGGAAAGTACATGCAGAGTATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGCTGCCACTAATAACTTGAAGGGAAACATCAATATTGGAGCAGCTCAAGCCATCCCTGAATTAGCAGGAGGGGTCATGAAAGATTTTAGTTCACCTCTTAGTTTTCCTTTTCAAGAACTCAACATCTATGGTGGCGGCAGCGGAGGCGGCAACGACCAACTTGATCATCATCTCCACCACATGGAGAGGCCACAGCTTGAAGGGTTAATGATGTCAAATAACAACAGTAACAATAATAATAACAATAATGAAAATTTGTGTCTAGGCAAGAAGAGGCCAAGTACTTATAATAGTACTACTACCGGGAAGAGTCCATTAATATGGAATGATGATCTTAGGCTTCATCAAGATTTAGGGACGGCTTCTTCATGCCTTGGGGGACCTCAAGATGATCCTTTCAAAGGCCTTGACCCACATCAACTTCACATTGCACCACCATCGTTGGATCATAGAGTAGGTGAGATGGATTCTATGTCAGAGATTTATGACACTAAGCCGGTGCTACAAGGAGAAGCTGTGTGTGACAAATTTTCAGATGCTTCGGTGAAGCTTGAAAGGCCGTCACCGAGAAGGACACCGACGACTACCACTCCTCTTCAGGGAGAAAGGATGAGCCCCATGATTAGTAGTGGTACTATGGCACAAGGAAGAAGCTCACCATTTGGGTGA 1203 0.4572 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDSMRASALNLQRNTASPSAMIGHHHNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMAATNNLKGNINIGAAQAIPELAGGVMKDFSSPLSFPFQELNIYGGGSGGGNDQLDHHLHHMERPQLEGLMMSNNNSNNNNNNNENLCLGKKRPSTYNSTTTGKSPLIWNDDLRLHQDLGTASSCLGGPQDDPFKGLDPHQLHIAPPSLDHRVGEMDSMSEIYDTKPVLQGEAVCDKFSDASVKLERPSPRRTPTTTTPLQGERMSPMISSGTMAQGRSSPFG 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0943 400 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Mibi01g0943 400 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Mibi01g0943 400 FunFam Myb family transcription factor 34 92 - -
Mibi01g0943 400 MobiDBLite consensus disorder prediction 359 400 - -
Mibi01g0943 400 MobiDBLite consensus disorder prediction 366 400 - -
Mibi01g0943 400 Gene3D - 34 92 - -
Mibi01g0943 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 203 IPR044848 GO:0003700
Mibi01g0943 400 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Mibi01g0943 400 MobiDBLite consensus disorder prediction 1 20 - -
Mibi01g0943 400 Pfam MYB-CC type transfactor, LHEQLE motif 133 172 IPR025756 -
Mibi01g0943 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0943 Mibi-ChrMibi01 12623248 12625643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0943 4 400 G2-like Transcription Factor Family AT1G79430 53.528 2.14e-124 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi01g0943 Myb_DNA-binding 2.3e-06 CL0123