Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0942 ATGACGCTGGCTTTCGCAGCATTGACCTTACGCTTGTCATCTATGCCATCTTCTAAGCTCATCCCTCGCTCTTTACACTTGCTTTCCTTGCGCACCACCACTCACTCCTTCTCTCGACAGATAAGCATGGATGCAAAGAGTGTGGCTTCTCAGCTTAAGAGTTCTGGTCTGTTGCGGACTCAGGGCCTTGTTGGAGGCAAATGGAGTGATGCCTATGATGGCAAAACCATGAAGGTTTATAATCCAGCAACTGGTGAATCTATAGCAGATATTGCATGCATGGGTGGAAGAGAGACAAATGATGCAATATCATCAGCCTATGATGCATTTCAATCATGGAGCAAAACCACTGCTGCTGAGAGGAGTAAACTTCTGAGAAAATGGTATGATTTGCTAATGGCGCGAAAGGAAGAGCTGGCACAACTTATAACCTTAGAGCAAGGAAAGCCTCTTCAAGAATCTCTTGGTGAGATAAATTATGGGGCTAGTTTTATTGAGTTTTCGGCAGAAGAGGCTAAGCGTGTATATGGAGATGTAATTCCTGCACCACTGTCTGATCGACGGCTATTTGTTTTAAAACAGCCTGTAGGGGTTGTTGGTGCTATCACACCTTGGAACTTTCCTTTGGCTATGATTACCCGGAAGGTTGGTCCAGCCCTTGCATGTGGCTGTACAGTGGTCGTTAAGCCCTCTGAACTTACTCCTCTCACAGCTTTGGCTTCAGCAGAGCTTGCGATTGAGGCTGGAATACCGGCGGGTGTTGTGAATGTAGTTATGGGAAATGCTCCTGAAATTGGGGATGCTATACTTGCAAGTCCACAGGTGAGGAAGATCACATTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCAGGTGCTGCCGGAACAGTTAAAAGAGTATCTCTGGAACTTGGTGGCAATGCCCCTTGCATAATATTTGATGATGCTGATCTTGATGTGGCAGTAAAAGGAACTGTTGCAGCTAAGTTTCGTAATAGTGGACAAACATGTGTATGTGCAAATAGAATTCTCGTGCAAGAAGGTATCTATGACAAATTTGCAACTGCAATCCTTGATGCTGTGAAGAATATGAAAGTTGGAGACGGTTTTAGTGAAGGTGTGGTTCAGGGACCTCTAATCAATGAAGCTGCTGTGGAAAAGGTTGAATCCTTACTTCACGATGCTACCTCTAAGGGAGCAAAAGTAGTTCATGGGGGTAAAAGACACAGCCTTGGATTCACTTTTTATGAACCTACAGTCGTCACTGATGTCAACAATGAGATGCGCATATCAAGAGAGGAAGTATTTGGACCCGTTGCACCTCTTTTGAGATTTAAAACTGAGGAGGAGGCTATAAAGATTGCCAACGACACTAATGCAGGGTTGGGTTCATATATATTTACAAACAATGTTCAACGCTCTTGGCGTGTTGCTGAGGCCCTCGAATATGGACTTGTCGGTGTAAATGAAGGAGTAATTTCAACAGAGGTTGCTCCATTTGGCGGTGTTAAACAGTCTGGCCTTGGAAGAGAAGGCTCTAAGTATGGGATGGATGAATATTTAGAGATCAAATATGTCTGCTTGGGAAACATGAACAAAAACTGA 1608 0.4415 MTLAFAALTLRLSSMPSSKLIPRSLHLLSLRTTTHSFSRQISMDAKSVASQLKSSGLLRTQGLVGGKWSDAYDGKTMKVYNPATGESIADIACMGGRETNDAISSAYDAFQSWSKTTAAERSKLLRKWYDLLMARKEELAQLITLEQGKPLQESLGEINYGASFIEFSAEEAKRVYGDVIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVVKPSELTPLTALASAELAIEAGIPAGVVNVVMGNAPEIGDAILASPQVRKITFTGSTAVGKKLMAGAAGTVKRVSLELGGNAPCIIFDDADLDVAVKGTVAAKFRNSGQTCVCANRILVQEGIYDKFATAILDAVKNMKVGDGFSEGVVQGPLINEAAVEKVESLLHDATSKGAKVVHGGKRHSLGFTFYEPTVVTDVNNEMRISREEVFGPVAPLLRFKTEEEAIKIANDTNAGLGSYIFTNNVQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKN 535
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0942 535 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 79 525 IPR010102 GO:0009013|GO:0009450
Mibi01g0942 535 Pfam Aldehyde dehydrogenase family 70 527 IPR015590 GO:0016491
Mibi01g0942 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491
Mibi01g0942 535 FunFam Succinate-semialdehyde dehydrogenase I 307 496 - -
Mibi01g0942 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
Mibi01g0942 535 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 53 532 - -
Mibi01g0942 535 FunFam Succinate-semialdehyde dehydrogenase I 74 317 - -
Mibi01g0942 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 331 342 IPR016160 GO:0016491
Mibi01g0942 535 CDD ALDH_F5_SSADH_GabD 79 529 - -
Mibi01g0942 535 FunFam Aldehyde dehydrogenase, putative 499 525 - -
Mibi01g0942 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 74 521 IPR016162 GO:0016491
Mibi01g0942 535 SUPERFAMILY ALDH-like 54 533 IPR016161 GO:0016491
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi01g0942 Mibi-ChrMibi01 12603095 12613195 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0942 19 535 Aldehyde Dehydrogenase Gene Family AT1G79440 77.756 0.0 822