Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0912 ATGGATCAATCAGAGCAGGCACAACAGCAGCAGCAACAAAAGCATGTGGTAGGAGTTGCATCTGGCGCTGGCCAGATGGCCTATTCTACTCACTACCAGACTGCCCCCATGGTAGCTTCTGGACCACCTGGTGTGGCTGTACCTTCCCCAACACAGCCTCCGGCCCCTTTCTCGAATCCCCCTCACCAAATTGCATACCAGCAAGCACATCATTTCCACCATCAACAGCAGCAGCAGCAACAGCAACAACTTCAGATTTTTTGGGCTAACCAATTGCAAGAAATTGAGCAAACAACTGACTTCAAGAATCACAGTCTTCCCCTTGCTAGGATTAAAAAAATAATGAAAGCTGATGAGGATGTGCGGATGATTTCAGCTGAGGCCCCAGTAATATTTGCAAAAGCATGTGAGATGTTTATCCTGGAGTTGACTCTGCGATCTTGGATCCACACGGAAGAAAACAAGAGGAGAACACTACAGAAGAATGATATAGCAGCTGCTATTTCAAGGACCGATGTTTTCGATTTCTTGGTTGACATTATCCCAAGAGATGAGTTGAAAGAAGAGGGACTTGGAGTAACAAAAGCTACAATTCCAGTTGTGGGTTCCCCAGCTGATATGCCCTATTATTATGTTCCACCTCAACATCCTGTTGGACCTACTGGGATGATCATGGGAAAACCAGTCGACCAGGCATCACTATATGCTTCCCAACAACCTCGACCTCCTCATTTGGCGTTCATGCCGTGGCCGCAAACACAACCTCCACAACAGCCGCCACCTGATCAGCAACAAACAGACACTTGA 807 0.4721 MDQSEQAQQQQQQKHVVGVASGAGQMAYSTHYQTAPMVASGPPGVAVPSPTQPPAPFSNPPHQIAYQQAHHFHHQQQQQQQQQLQIFWANQLQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKATIPVVGSPADMPYYYVPPQHPVGPTGMIMGKPVDQASLYASQQPRPPHLAFMPWPQTQPPQQPPPDQQQTDT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0912 268 MobiDBLite consensus disorder prediction 39 62 - -
Mibi01g0912 268 MobiDBLite consensus disorder prediction 244 262 - -
Mibi01g0912 268 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 56 238 - -
Mibi01g0912 268 MobiDBLite consensus disorder prediction 46 60 - -
Mibi01g0912 268 MobiDBLite consensus disorder prediction 236 268 - -
Mibi01g0912 268 Pfam Core histone H2A/H2B/H3/H4 61 168 IPR007125 GO:0003677
Mibi01g0912 268 SUPERFAMILY Histone-fold 63 177 IPR009072 GO:0046982
Mibi01g0912 268 FunFam Nuclear transcription factor Y subunit gamma 71 183 - -
Mibi01g0912 268 Gene3D Histone, subunit A 66 183 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0912 Mibi-ChrMibi01 11880259 11881065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0912 84 212 CCAAT-HAP5 Transcription Factor Family AT1G56170 91.538 4.24e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi01g0912 Histone 6.7e-18 CL0012