Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0909 ATGGATCCTAGATATGATGGCTTCCAGTCTGTGTCACAGTCTGTAATGCAGGACCATCTGGATGGTGTGCATGCTAATCGGGGGCCATATGCCCCTAATCCATCTGAAGTTAAACCTGTACTTAATTATTCCATACAGACTGGTGAGGAGTTTGCGCTTGAATTTATGTTGGATAGGGTGAATCTTAGGAAGCCTGTAATTTCCAACGTTGGTGATCCCAATTCTGCAACAGGTTATAGTAGTCGTGCTGGATGTGAAAGTGGATCAGATATTCATATGCGTGAAATGGTCGGCAGAGATCCAAAAGAGTATGATGGAAAGAATACATTATTACATGGAGGCAGAGGCAATTATGGATCAATTCAATCAATGCCAATGACTTCATATAATCAAGAAAATGGTCGATTTTTGCATGGGTATACTTCTTATGGAGGTTCTGATGGCTCATCAATGACAATGAAAGTCCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCTGGTGATGGAAAACTTAGATATGTTGGAGGTGAAACACGCATTATCCGAATAAGAAAAGACATATCTTGGCAGGAGCTTATGCAGAAATCATTGTCTATATATAATCAAACTCAAGTAATTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTCTCTGTGTCATCTGACGAAGATTTGCTGAATATGATGGAGGAATGTAATCATCCACAAGATAGAGAAAGATCACAAAAGCTTAGAATTTTTTTATTTTCAATGAGTGATTTGGATGATGCTCAATTTGGACTCAGTAGTGTGGGTGATGATTCTGAGGTCCAGTATGTGGTTGCTGTTAATGGCATGGACTTTGGTTCAAGAAACAACTCAGTGCTTCTTGGTGCGAGCTCTTCAGCTAATGATTTACATGAATTGGACAGGCAAAATACTGAGAGGGAGGTTGGGAAAGTTCCTGTAGAATCTATAGGTGTCATCAACGCTCCCCTGACTGGGAATTATGACTCATCATCAACCATTCAGTCTTCAAAATCAATGCTTCTAACTTCCTCAAATGCTTACGAAACCTATCCACACTACAGAGACCAGATGATGCACCTTGGGGAGACTTTTAGTCAATATCCCATTCACCATGGTCTTAATCCATCTCAAAACTTTACTTACGTAGAGACTTCTAATGCCATGCCTCATGGGATGATAAATCAACAAGGAATTTTGAATGATGGTTGTTCTCCTAATGGATTACATGTGCCGAATCCGGAAATACCAGCAATGCTAGTGAAAAAAATGGGTGATAGTTCGGTCCCACAAGGATGTAACCCTGCTAAAGTGCTATCCTCAGTAGCACCATCCCCTGTTGCTACACAGCCAAAAAATGATTTCTTGGCTAACAATGTTAATAAAGCTACAGTTGTAGTCAACATACCGGAGGGGAAACTACCCACACTGCCATTGATGAAAAAGGAGCAGCACCAGGAGTATAAAGAGGCCTCTTCCACATCTAGCAGTGCATTTGGTCCTGGTAATGTTGATGCTCAATCCGATGGGAGTGATTTAAGTTGCCTGCACCCTCCTCCAATGCCCAAAAGAGTTTACTATTCTTATTCTGAAAGAACTCCTAGGGAGCAGGTAGAATTGCTGAATCGGTCGGCAAAGTCAGATGACACGTATGATTCTCAGTTTCCTGTATCAGATTTACTTTCTGACATCAATCCCCAGTACTCAGTCACAGAATCTGGTGACAACTTGCATAATAGCAATCAGTCTAATTTAACAGAGGATTCAAGTGCCTTATCAAAACCAATGTATGTGGATGGCAACATCATTTTTAATGGGCTTAACGAACTACAGATGCACAAACCATCTCCTGAGACGAGCAGTCAGATAAAGTCAAAACTCTCAGAACATGTGGATGTGGAGTTGAAGCAGGTATTACCAAACGATGAAGGAGGTAAAGTGGTGGTAAATGAGGATCAGGTCATCAGGTCTGAGGCTGATAGTTATTTTGAAGATATTCACAGCAAACCTCTGGTTGATGAAAACAAAAACTTTAGATCAGATTTCCCTCCTTTGGATCAGGTTCCCTCTTTTAAGCACAACGATGGCCCAACATCTCATCTTCCGGAGAATAATTGGGGTCATGGCACAGGGAAAGAATCGAATAATGATCCCATGGTGCATGAAATACCTGTTTCTTTGACTGGGAACACATCTGAAGACATTTCTCAAGGTTTTACATCAAGTGATCTTCCCAAACAAGCACAGGCTGACATTCTTATTGATATTGATGATCGATTTCCTCGTGAATTGCTTTCTGATATGTATACTAAAGCAGTACTTGCGGAAGACCCGTCCAGTCTACATCCACTAACTAATATTGGGATGGGCATAAGCATAAACATGGAAAACCATGAACCTAAGTCATGGTCATATTTTGGGAAATTGGCACAAGAAGGGCTGGATAACTTCTCTCTTATTGACCGGGATCCTCTTGGTTTTTCCCCTGAATCTGGAAATGTAAATGATAAAACTCACCTTGTCACACCGCCAACACCTGATGGAATATCTGTAGACCAAGCTGATTTGCATCTCAATTTTGATGGAGAAAGTCAGAAGGGTTTTCATGGAATAATTGGAACTGAAACCACTTTTGTGCAGTCTAATTATGATAATTCCCAAGTGAAGGAGACTGAAAGTATGCGGTTTGATGCTACAGTGGAGAATTCAAGAGGTCAAGAGTCAGAATTTGAGGATGGGAAGTTTGAAACAAAAAATGGTGGTCTGCCTTCACTTGATCCTTCTCTGGGAGGTTTTGCATTTGATATCAGTACCTTACAGGTAATAAAGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCCGGGACCTTTGGAACTGTGTATCATGGTAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATTAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAGGCTGACATTCTTTCCAAGCTTCACCATCCAAATGTTCTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCTATGGATGCAGCTTTTGGAATGGAGTATTTACACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGACCCTGTGAGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGAAATACATTGGTTTCTGGTGGTGTGCGGGGAACCCTGCCTTGGATGGCTCCAGAGCTGCTGAATGGCAGTAGCAATAAAGTGTCAGAAAAGGTTGACGTGTTCTCTTTTGGAATAGTATTATGGGAGATTCTTACCGGCGAGGAGCCATATGCCAACATGCACTATGGTGCAATCATAGGTGGGATTGTAAATAACACATTAAGACCAACAATACCAAGCTCTTGTGATGCTGAATGGAGGACACTGATGGAGCAATGTTGGGCACCCAACCCTGCAGCCAGGCCTTCCTTCACAGAAATAGCCAGTCGCTTAAGGGTCATGTCTGCTTCTGCCAAATCACAGCCTAACAAGCCAACCAAATGA 3696 0.4156 MDPRYDGFQSVSQSVMQDHLDGVHANRGPYAPNPSEVKPVLNYSIQTGEEFALEFMLDRVNLRKPVISNVGDPNSATGYSSRAGCESGSDIHMREMVGRDPKEYDGKNTLLHGGRGNYGSIQSMPMTSYNQENGRFLHGYTSYGGSDGSSMTMKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRKDISWQELMQKSLSIYNQTQVIKYQLPGEDLDALVSVSSDEDLLNMMEECNHPQDRERSQKLRIFLFSMSDLDDAQFGLSSVGDDSEVQYVVAVNGMDFGSRNNSVLLGASSSANDLHELDRQNTEREVGKVPVESIGVINAPLTGNYDSSSTIQSSKSMLLTSSNAYETYPHYRDQMMHLGETFSQYPIHHGLNPSQNFTYVETSNAMPHGMINQQGILNDGCSPNGLHVPNPEIPAMLVKKMGDSSVPQGCNPAKVLSSVAPSPVATQPKNDFLANNVNKATVVVNIPEGKLPTLPLMKKEQHQEYKEASSTSSSAFGPGNVDAQSDGSDLSCLHPPPMPKRVYYSYSERTPREQVELLNRSAKSDDTYDSQFPVSDLLSDINPQYSVTESGDNLHNSNQSNLTEDSSALSKPMYVDGNIIFNGLNELQMHKPSPETSSQIKSKLSEHVDVELKQVLPNDEGGKVVVNEDQVIRSEADSYFEDIHSKPLVDENKNFRSDFPPLDQVPSFKHNDGPTSHLPENNWGHGTGKESNNDPMVHEIPVSLTGNTSEDISQGFTSSDLPKQAQADILIDIDDRFPRELLSDMYTKAVLAEDPSSLHPLTNIGMGISINMENHEPKSWSYFGKLAQEGLDNFSLIDRDPLGFSPESGNVNDKTHLVTPPTPDGISVDQADLHLNFDGESQKGFHGIIGTETTFVQSNYDNSQVKETESMRFDATVENSRGQESEFEDGKFETKNGGLPSLDPSLGGFAFDISTLQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSSCDAEWRTLMEQCWAPNPAARPSFTEIASRLRVMSASAKSQPNKPTK 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0909 1231 Gene3D - 171 254 - -
Mibi01g0909 1231 CDD STKc_MAP3K-like 958 1215 - -
Mibi01g0909 1231 Gene3D Phosphorylase Kinase; domain 1 945 1039 - -
Mibi01g0909 1231 MobiDBLite consensus disorder prediction 487 524 - -
Mibi01g0909 1231 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1040 1231 - -
Mibi01g0909 1231 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 172 254 - -
Mibi01g0909 1231 ProSiteProfiles Protein kinase domain profile. 952 1217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0909 1231 PRINTS Tyrosine kinase catalytic domain signature 1142 1164 IPR001245 GO:0004672|GO:0006468
Mibi01g0909 1231 PRINTS Tyrosine kinase catalytic domain signature 1071 1089 IPR001245 GO:0004672|GO:0006468
Mibi01g0909 1231 PRINTS Tyrosine kinase catalytic domain signature 1186 1208 IPR001245 GO:0004672|GO:0006468
Mibi01g0909 1231 PRINTS Tyrosine kinase catalytic domain signature 1034 1047 IPR001245 GO:0004672|GO:0006468
Mibi01g0909 1231 SMART PB1_new 167 252 IPR000270 GO:0005515
Mibi01g0909 1231 SUPERFAMILY CAD & PB1 domains 169 259 - -
Mibi01g0909 1231 Pfam PB1 domain 169 252 IPR000270 GO:0005515
Mibi01g0909 1231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1077 1089 IPR008271 GO:0004672|GO:0006468
Mibi01g0909 1231 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 945 1039 - -
Mibi01g0909 1231 MobiDBLite consensus disorder prediction 571 592 - -
Mibi01g0909 1231 Gene3D Transferase(Phosphotransferase) domain 1 1040 1231 - -
Mibi01g0909 1231 ProSitePatterns Protein kinases ATP-binding region signature. 958 983 IPR017441 GO:0005524
Mibi01g0909 1231 PANTHER SERINE-THREONINE PROTEIN KINASE 194 1216 - -
Mibi01g0909 1231 Pfam Protein tyrosine and serine/threonine kinase 953 1215 IPR001245 GO:0004672|GO:0006468
Mibi01g0909 1231 CDD PB1_UP2 156 252 - -
Mibi01g0909 1231 SUPERFAMILY Protein kinase-like (PK-like) 943 1214 IPR011009 -
Mibi01g0909 1231 SMART serkin_6 952 1218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0909 1231 MobiDBLite consensus disorder prediction 495 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0909 Mibi-ChrMibi01 11847003 11854024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0909 1 358 MAP Kinase Kinase Kinase AT1G16270 53.151 1.41e-85 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mibi01g0909 PK_Tyr_Ser-Thr 3.1e-62 CL0016