Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0900 ATGGCCATCCTGGTTACCTTCCCTATTATTTTCTCATGGTTTTGTCTCTGGAGAACCAGTTTTGGTGCAGAAAGAAGTAGTTTGAAGCCAGGCGAAGTGGTTAATCACACAATCTGGCTAACTTCTCAAAACCAAAGGTTCTATCTAAAACTTGAACCACTTGAACAGTACTCTAACCTCACCTATCTTTTTATAGGCCACAGAGACACTCCCACTGAAGATGAAGAGGACACCAACCAAGGTTATAGGAGTTGGTTTGCAAACAGAAACCACCCCATCTCCAACAATTCTTCTTCCAACAACTTTACTTTGGATTATTCTGCTTCTCTCACAATCAACCGTCAAAATGGGAAGCCAATAACCCTTTATCCTCCTGTCAAATCTGAAGTTACCAACAACAATAATACCATTCTTACTCTATCAGATTCAGGAAACTTGATCCTGCATCATTTGCATCCCAATGGTGTTCCAAAACATGTTTTGTGGCAGAGTTTTGATCATCCTTCTGATATACTACTTCCTGGCATGAAGTTAGGAGTTAATCACAAAACTCATCAATCTTGGTATGTCACAGCCTCTATTTCTGCTGCATCCCCTGCTTCTGGTTCATTCACACTCGAGTGGGATCCAAGAAGAAAGCAATTGATCATTAAGAGACAAGGGAAGATATATTGGATGAGTGGGGTGTTGAAAAACAAAAGATTTGTGAACATACCAGAACAAGTTCAGAAGTTTTATGAGTACAACATTGTCTCAACCGAAGAGGAAGATTCATTTAGTTTCAGCAGTAAATATGATGATTCACAGTGGGTTCTGTTTCATAATGGTCGGTTATTGGAAACAAGAGGGGATGATTTTCTCATTGCCAGTGCTGATGCTTGCTATGGTTATAACAGTGAAGGTGGCTGTCAAAAATGGGAGTCTCCTAAATGTAGAAAGCCTTGTGAAAAATTCCAAATCCAGTTTGTACATCTTGATTTTCCATTTGGGAATGGTAGTTTTTCTGTGAGGGACACAAACATTAGTATTGGTGAAAGTGATTGCAAGGCTACTTGCTGGACCAACTGTACCTGCTTTGGATTCAAAACGCTTAACTCCAATGGAACTGGATGCATATATTACCATGGACATTGGAGGACAATTAATGTTGGCTCTAGGGATGCAAGCACTAACATCTTAGTACGACAATCGCCATATGACTTGGTTCATAAAGATTTGAAGAACTGGAAAATAACTGGTCCTGTCATGGCTTCAGCTCTGATTCCAATCTGCCTTGGCATTTTCTACCTAAGTAGGTGGAGAAAAGCAAGTGAAGTTAAAGGCAATGGAAGAAGCAAAGAGGAGAATCAGCTCCTCGACTTGGCGTCCTTTGATAGACAAACTACTGTTAATGACCTCAAAAATGATGTAAAAAAGGGGAATTTAAAAATTTTCAACTATGAATCAATCATGGGAGCAACAAACAGGTTCTCACCGGAGAACATGGTAGGCAAAGGAGGCTTTGGACCTGTATATAAGGGATTATTGCCACTGGGAGAAGAAATAGCCATTAAAAGGCTTTCAAGAGGCTCAGCACAAGGAGGGATTGATGGATACATGTCGCCAGAGTATGCCATGGAAGGAATTTTCTCCACCAAATCAGATGTCTATAGTTTTGGAGTTTTGCTGCTTGAAATTGTGAGTGGTAGAAGAAATAACAGTTTCTGCAATTCCCAAGGTCCACTAAACCTTGTAGGTCAGGCTTGGGAACTATGGAAAGAAGGTCAAGTTCTAGACATAGTTGATCCAACTTTAAGAGAGCAATGTGATCCAGGTCAAGTATCAAGATGTGTCCACATTGGACTTTTATGTGTAGAAGAAAATGCAGAAGATCGTCCAGCTATGTCAGATGTTATAGCCATGCTGGCCAGTGAAACTGCATCACTTCCCTTCCCAACAAGACCAGCATTTTGTAGTGGAAGAAAGCTCAAAAAGAAATATTATCCTGATGATTTCAAAATTTATTCTGTGAATGGTTTGTCTATTTCTACCATAAGAGCAAGATAA 2046 0.3998 MAILVTFPIIFSWFCLWRTSFGAERSSLKPGEVVNHTIWLTSQNQRFYLKLEPLEQYSNLTYLFIGHRDTPTEDEEDTNQGYRSWFANRNHPISNNSSSNNFTLDYSASLTINRQNGKPITLYPPVKSEVTNNNNTILTLSDSGNLILHHLHPNGVPKHVLWQSFDHPSDILLPGMKLGVNHKTHQSWYVTASISAASPASGSFTLEWDPRRKQLIIKRQGKIYWMSGVLKNKRFVNIPEQVQKFYEYNIVSTEEEDSFSFSSKYDDSQWVLFHNGRLLETRGDDFLIASADACYGYNSEGGCQKWESPKCRKPCEKFQIQFVHLDFPFGNGSFSVRDTNISIGESDCKATCWTNCTCFGFKTLNSNGTGCIYYHGHWRTINVGSRDASTNILVRQSPYDLVHKDLKNWKITGPVMASALIPICLGIFYLSRWRKASEVKGNGRSKEENQLLDLASFDRQTTVNDLKNDVKKGNLKIFNYESIMGATNRFSPENMVGKGGFGPVYKGLLPLGEEIAIKRLSRGSAQGGIDGYMSPEYAMEGIFSTKSDVYSFGVLLLEIVSGRRNNSFCNSQGPLNLVGQAWELWKEGQVLDIVDPTLREQCDPGQVSRCVHIGLLCVEENAEDRPAMSDVIAMLASETASLPFPTRPAFCSGRKLKKKYYPDDFKIYSVNGLSISTIRAR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0900 681 Gene3D - 21 166 IPR036426 -
Mibi01g0900 681 SUPERFAMILY Protein kinase-like (PK-like) 531 652 IPR011009 -
Mibi01g0900 681 Gene3D Transferase(Phosphotransferase) domain 1 507 642 - -
Mibi01g0900 681 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 229 IPR036426 -
Mibi01g0900 681 Pfam Protein tyrosine and serine/threonine kinase 532 634 IPR001245 GO:0004672|GO:0006468
Mibi01g0900 681 SUPERFAMILY Protein kinase-like (PK-like) 470 523 IPR011009 -
Mibi01g0900 681 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 83 626 - -
Mibi01g0900 681 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 520 640 - -
Mibi01g0900 681 Pfam D-mannose binding lectin 85 192 IPR001480 -
Mibi01g0900 681 Pfam PAN-like domain 342 376 IPR003609 -
Mibi01g0900 681 ProSiteProfiles Bulb-type lectin domain profile. 25 161 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0900 Mibi-ChrMibi01 9319496 9323009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0900 528 650 Receptor kinase-like Gene Family AT4G23150 57.724 5.92e-41 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0900 PK_Tyr_Ser-Thr 8e-10 CL0016