Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0894 ATGGGAAAAGGAAGAGCTCCATGCTGTGATAAGAGCAAAGTGAAGAGAGGACCTTGGAGCCCTCAAGAAGATCTTAAGCTCATCTCCTTCATCCAGAAACATGGTCATCTCAATTGGCGTTCTCTCCCCAACCAAGCTGGGCTTCTTCGATGTGGAAAAAGCTGTCGTCTGAGATGGATTAACTACCTAAGGCCTGATGTGAAGAGAGGCAACTTCACCAAAGAAGAAGAGGAGACCATTGTGAAGCTCCATGAGACCTTTGGAAACAAGTGGTCAAAAATAGCGTCGGTGTTGCCTGGCAGAACAGACAATGAGATCAAGAATGTGTGGCACACTCACTTGAAGAAGAAACTATTGAAGAAGTCCGCCATTACTGATGATGATCATCATCAATCCAAGCAACAATCATCTTCATGCATAACCTCCTCCTCCTCCTCATCTTCCTCATCAACCGGACACCAACCAGCGACAACAACAATAATTCCTCAGACAGACAATATTAATCAAGATCAGCGTTTTACTACTGATCATTCATCATTAACATCTATATGCAAATTACAAGAGGATCATCCTCAGCTGGAACTAGTTGCAGCAGGTTCTTCATTAAAGGGGCCAGAAGATGATAGTAAAAATAATACAATAGTACTAAACGAGGTTGTTGACAAGCCAGGTAATAGTGGTTTGCTGGAAATACCATTGGAGGCAGATGATGATTTTTGGAACATGTTGGATGATGACAATATAGGAGCTGATGAAGGAGGATCGTTGGTGTCAAATAATGATCATCATCAGATTCATCATTTAGATGTTGATAATATGAAGTACTGGATCAGGGAGATTGAGAAGGATCTTGGATTGGAACCTCAGGCATCATCTTCTGATGATCTAACCATAGGATTGTCTGATATAGACATATGGCCTAATAATGGTAGTGCTGGTTTCTGA 945 0.4169 MGKGRAPCCDKSKVKRGPWSPQEDLKLISFIQKHGHLNWRSLPNQAGLLRCGKSCRLRWINYLRPDVKRGNFTKEEEETIVKLHETFGNKWSKIASVLPGRTDNEIKNVWHTHLKKKLLKKSAITDDDHHQSKQQSSSCITSSSSSSSSSTGHQPATTTIIPQTDNINQDQRFTTDHSSLTSICKLQEDHPQLELVAAGSSLKGPEDDSKNNTIVLNEVVDKPGNSGLLEIPLEADDDFWNMLDDDNIGADEGGSLVSNNDHHQIHHLDVDNMKYWIREIEKDLGLEPQASSSDDLTIGLSDIDIWPNNGSAGF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0894 314 CDD SANT 71 113 IPR001005 -
Mibi01g0894 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Mibi01g0894 314 SMART sant 68 116 IPR001005 -
Mibi01g0894 314 SMART sant 15 65 IPR001005 -
Mibi01g0894 314 MobiDBLite consensus disorder prediction 124 169 - -
Mibi01g0894 314 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Mibi01g0894 314 MobiDBLite consensus disorder prediction 134 169 - -
Mibi01g0894 314 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Mibi01g0894 314 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mibi01g0894 314 CDD SANT 18 63 IPR001005 -
Mibi01g0894 314 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mibi01g0894 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Mibi01g0894 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 187 - -
Mibi01g0894 314 Gene3D - 8 68 - -
Mibi01g0894 314 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mibi01g0894 314 Gene3D - 71 141 - -
Mibi01g0894 314 FunFam Transcription factor RAX3 9 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0894 Mibi-ChrMibi01 9270126 9272693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0894 1 287 MYB Transcription Factor Family AT1G79180 46.584 3.77e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0894 Myb_DNA-binding 3.4e-13 CL0123