Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0884 ATGGTCATGATCGACGCTGGATCGACCGTCATGGCCACTTCGCCGATGAAGAAGATCGAACTTGCCCACCAGCTTTACCGCGACGGACGGTACGGCGATGCCCTAAGTTTCTACACGGAGGCTATTGGGATGGCTAAGACTAGGGCTCAAAAGATTGCTTTGCATAGTAATAGAGCTGCTTGTTATCTTAAGCTTCACGATTTCAAAAAGGCTGCAGAAGAATGTACCTCAGTGCTTGAGCTAGATCACCAGCACAGTGGAGCACTGATGCTGCGAGCTCAAACATTGGTCACCCTTAAGGAGTACCATTCAGCACTTTTTGATGTCAACCGGCTGTTAGAGTTGGACCCATCCTCAGAGGTGTATCAAAATCTTCAAGCTCGCTTAAGAACACAATTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAACAAGGTGATGATGAGGATGAGGTGACAGTAAAAGGATACAATAAATGGAAAAAATTCCCAGAGAAAAATTTTGGGGGAGCTCAGGGAGATGAGCTTGACAATGCTACTATTAATGCTGAAATAGACTCCAACTTATCATCTGAACAAAGAATAGACCAAAACTCTGAGCCAAGAACTTCAACATCAGAGACAACTGCCACAGCACCACACAAGGAACCGGCTGAGCAACATTCCAAAACATGGCAATCGGTTCCAAAACCAAAAGGGCATTCAGCTTTAAACTATGCACGATGGGACAGCATTGAAGATGATTCAAGTGAAGACGATGATGATGACGAAGATGAAGAGGAATCTCAGCCCCAGTACCGATTTCGTGTAAAAACCATAGGTGTACGATCGGTAAAGTGA 849 0.4499 MVMIDAGSTVMATSPMKKIELAHQLYRDGRYGDALSFYTEAIGMAKTRAQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHQHSGALMLRAQTLVTLKEYHSALFDVNRLLELDPSSEVYQNLQARLRTQLSLAPIPESEEEFEEQGDDEDEVTVKGYNKWKKFPEKNFGGAQGDELDNATINAEIDSNLSSEQRIDQNSEPRTSTSETTATAPHKEPAEQHSKTWQSVPKPKGHSALNYARWDSIEDDSSEDDDDDEDEEESQPQYRFRVKTIGVRSVK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0884 282 MobiDBLite consensus disorder prediction 249 264 - -
Mibi01g0884 282 SMART tpr_5 86 119 IPR019734 GO:0005515
Mibi01g0884 282 SMART tpr_5 15 48 IPR019734 GO:0005515
Mibi01g0884 282 SMART tpr_5 52 85 IPR019734 GO:0005515
Mibi01g0884 282 Pfam Tetratricopeptide repeat 67 129 - -
Mibi01g0884 282 MobiDBLite consensus disorder prediction 189 282 - -
Mibi01g0884 282 MobiDBLite consensus disorder prediction 189 216 - -
Mibi01g0884 282 Gene3D Tetratricopeptide repeat domain 16 151 IPR011990 GO:0005515
Mibi01g0884 282 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 11 282 - -
Mibi01g0884 282 SUPERFAMILY TPR-like 19 132 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0884 Mibi-ChrMibi01 9139119 9142193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0884 17 133 Calmodulin-binding Proteins AT3G25230 34.109 1.05e-14 72.0