Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0877 ATGGGTGAAGAAGAATTGATGAGGAAGGAGGAAGGTGAGAGGTTTATGGAAGAAGAGGAAGATGATGAAGAAGTTGAGCTTCCAGGGTTTCGATTTCATCCCACAGATGAAGAACTTGTGGGTTTTTATCTACGAAGGCAGCTTGACAAGAAACCAATCAAGATCGAACTCATCAAGCAGATCGATATCTATAAATACGACCCTTGGGACCTTCCAAAAGCGAGCTACACGGGAGGGGAGAAGGAGTGGTATTTCTTCTGCAAGAGAGGGAGGAAATACAGGAACAGTATAAGGCCAAATAGAGTGACGGGGTCAGGTTTCTGGAAAGCCACAGGGATAGACAAGCCTGTGTATTCAGTTGGAGGACAAGGTAGTAGTGATTGCATTATTGGACTCAAGAAGACTCTTGTTTACTACAGGGGCAGTGCTGGTAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTCCCTTCTCTTCATGATTCCGCCCCCGCCAACACTGCCACCGCTGCTATCACCACCACCACTATCGCCCAACAAGCTGAAATCTGGACATTGTGTAGAATATTCAAGAGAAATGTTCCGCCGAGGAAGCACATGACAGACTGGAGATCATCATCAACATCACAACCTGCAGGTACCAACAAACGCCAATATTCTTCAGTGGAAAAGAACACATCAAGCACTTTGGAGAGTGATCATACTAACTTCTACAATGATAACAAAGAAGCTTACATCAATTTTGGAGGAAGCAACAATCATCATCATCATGGTCATCATCATTATTATTCTCAGGTCAATCATCATTATCATGAGCAGAAGCCAGAAGTTTTCAATACAAACGTTGATCAAAGGAATAATCATCATCAGTTGATGATGTTGAATTCTTCATCCCAAGCAGCTACACAACAACAGCCACAATTAATCACTGCTTCTTCTTCTAACTTGTGGCTTAATAACCCTTCTGCTGCTGCTGCTGCTGCTTCTGCCAGCGACTTCTTCACCTACGAGAATTGGGACGAACTTGGATCAGTTGTTAAGTTTGCTTTTGATTCCTCCATTGTGTAA 1074 0.4339 MGEEELMRKEEGERFMEEEEDDEEVELPGFRFHPTDEELVGFYLRRQLDKKPIKIELIKQIDIYKYDPWDLPKASYTGGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSVGGQGSSDCIIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSLHDSAPANTATAAITTTTIAQQAEIWTLCRIFKRNVPPRKHMTDWRSSSTSQPAGTNKRQYSSVEKNTSSTLESDHTNFYNDNKEAYINFGGSNNHHHHGHHHYYSQVNHHYHEQKPEVFNTNVDQRNNHHQLMMLNSSSQAATQQQPQLITASSSNLWLNNPSAAAAAASASDFFTYENWDELGSVVKFAFDSSIV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0877 357 ProSiteProfiles NAC domain profile. 26 194 IPR003441 GO:0003677|GO:0006355
Mibi01g0877 357 Pfam No apical meristem (NAM) protein 28 158 IPR003441 GO:0003677|GO:0006355
Mibi01g0877 357 MobiDBLite consensus disorder prediction 202 235 - -
Mibi01g0877 357 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g0877 357 FunFam NAC domain-containing protein 35 35 197 - -
Mibi01g0877 357 MobiDBLite consensus disorder prediction 200 235 - -
Mibi01g0877 357 Gene3D NAC domain 35 196 IPR036093 GO:0003677|GO:0006355
Mibi01g0877 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 288 - -
Mibi01g0877 357 SUPERFAMILY NAC domain 26 194 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0877 Mibi-ChrMibi01 9029659 9031582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0877 16 194 NAC Transcription Factor Family AT5G39820 56.771 1.59e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g0877 NAM 6.8e-36 No_clan