Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0865 ATGGCGAAACCTGGGCGAGGCCGTCGCTCTCCGCCGTCAGGTTCAATCTCAGGCTCATCATCTCGCTCTAGGTCTTCGTCTCCCTCTGATTCCCGCTCCAGCTCTCGCTCTCGCTCCGTTTCCCGCTCTCCCTCTCGCTCCAGATCCTTCTCCTCTTCCTCTTCTCCTTCCCGCAGTGTCAGTTCCGGTAGCCGAAGCCCCCCGCCTCCTAGGAGGAAAAGTCCTGCTGAACCAGCTAGGAGAGGTAGATCTCCTCCTCCCCAATCTAAAAAGATCTCTCCACCCCCCAGGAAGCCTTCTCCTATCCGTGAATCACTTGTTCTTCACGTAGACAAACTCAGCAGGAATGTTCATGAAGGCCATTTGAAAGAAATATTTAGTAACTTTGGCGAGGTTGTAAATGTGGAGTTGGCCATGGATCGATCTGTTAACCTTCCTAAAGGATATGGATACGTGGAATTCAAGACAAGAGGGGATGCAGAAAAAGCCTTACTATACATGGATGGTGCTCAAATTGATGGTAATATTGTTAAGGCCAGATTTACCTTGCCGCCAAGGCAGAAGGTTTCACCACCCACTAAGGCTCCTGCTCTTGCTCCAAAGAGAGATGTTCCTAGAGCTGATATTGCTGGTGCAGATGCTGAAAAGGATGGACCAAAGCGGCTAAGAGAACCTTCTCCTAGGAGAAGACCTCCTTCACCACGAAGGAGATCTCCTGTGCCTCGAAGAGGTGGATCACCCAGACGACTGGATTCTCCTGTTCGTCGCCGAATGGACTCACCATATCGTCGTGGAGACACACCTCCTAGAAGGAGGCCTATCTCCCCTGCAAGAGGCAGATCTCCTTCTCCACCTAGGCGCCTTAGATCCCCTGCAAGGGTCTCACCTAGAAGGATGCGTGGAAGTCCAATTCGCAGGCGTTCTCCTCCTCCTCCTCGGCGCCGTTCACCACCTAGACGAGCTCGTAGTCCTAGGAGGTCGCCAATCAGTCGCAGACGTAGTCGATCTCCACCACGCAGATCTGCACGCTCACGATCAAGATCCTTCTCACCACCACCACGGAGAGGTCGGCCACCTATGAGACGTGGAAGGTCATCATCATCATTCTCTGATTCACCAAGTCCTCGCAAGTTAACACGGAAATCAAGGAGTCGCAGTCCAAGAAGGCCTTTGAGAGGAAGAGGTAGTAGCAATAGCAGCAGCAGCAGCTCACCACCCCCAGCTCGCAGACCATAG 1236 0.5299 MAKPGRGRRSPPSGSISGSSSRSRSSSPSDSRSSSRSRSVSRSPSRSRSFSSSSSPSRSVSSGSRSPPPPRRKSPAEPARRGRSPPPQSKKISPPPRKPSPIRESLVLHVDKLSRNVHEGHLKEIFSNFGEVVNVELAMDRSVNLPKGYGYVEFKTRGDAEKALLYMDGAQIDGNIVKARFTLPPRQKVSPPTKAPALAPKRDVPRADIAGADAEKDGPKRLREPSPRRRPPSPRRRSPVPRRGGSPRRLDSPVRRRMDSPYRRGDTPPRRRPISPARGRSPSPPRRLRSPARVSPRRMRGSPIRRRSPPPPRRRSPPRRARSPRRSPISRRRSRSPPRRSARSRSRSFSPPPRRGRPPMRRGRSSSSFSDSPSPRKLTRKSRSRSPRRPLRGRGSSNSSSSSSPPPARRP 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0865 411 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 176 IPR000504 GO:0003723
Mibi01g0865 411 MobiDBLite consensus disorder prediction 291 342 - -
Mibi01g0865 411 MobiDBLite consensus disorder prediction 12 67 - -
Mibi01g0865 411 Gene3D - 13 190 IPR012677 -
Mibi01g0865 411 FunFam Serine/arginine-rich splicing factor SR45 3 191 - -
Mibi01g0865 411 CDD RRM_RNPS1 108 180 IPR034201 -
Mibi01g0865 411 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 2 258 - -
Mibi01g0865 411 MobiDBLite consensus disorder prediction 206 231 - -
Mibi01g0865 411 MobiDBLite consensus disorder prediction 183 411 - -
Mibi01g0865 411 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 106 184 IPR000504 GO:0003723
Mibi01g0865 411 SMART rrm1_1 107 180 IPR000504 GO:0003723
Mibi01g0865 411 MobiDBLite consensus disorder prediction 1 103 - -
Mibi01g0865 411 MobiDBLite consensus disorder prediction 391 411 - -
Mibi01g0865 411 SUPERFAMILY RNA-binding domain, RBD 94 188 IPR035979 GO:0003676
Mibi01g0865 411 MobiDBLite consensus disorder prediction 248 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0865 Mibi-ChrMibi01 8543972 8548839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0865 108 181 Eukaryotic Initiation Factors Gene Family AT2G23350 31.081 7.84e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0865 01 8543972 8548839 Mibi01g0865 01 8543972 8548839 ECH