Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0847 ATGAGCAGCATAAGCTTGGTAGAGGCGAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAGAGATGAAGAGCTGGTATGTGATTACTTAATGAAGAAGGTGACACACTGTGACTCCTCTCTCATGATTGATGTTGATCTTAACAAGTGCGAACCATGGGACATTCCTGAGGCAGCATGTGTAGGAGGGAAGGAGTGGTATTTCTACACACAGAGAGACCGCAAGTATGCCACTGGCCTACGCACCAATCGTGCCACTGCCTCAGGCTACTGGAAGGCCACAGGGAAGGACAGACCTATCCTTCGCAAGGGCACCCTTGTTGGCATGAGGAAGACTTTGGTGTTCTATCAAGGAAGGGCACCCAAAGGGAGAAAGACCGAATGGGTCATGCATGAGTTTCGCCTTGAAGGTCCCCTTGGCCCTCCTAAACTCTCTTCAGCCAAGGAGGATTGGGTTCTGTGCAGGGCGTTCTTCAAAAACAGAGAACCTTCAACGAAACAGAGCATCGGAAGCTGCTACGACGACACAGGATCTTCATCTCTACCTGCATTAATGGATTCTTACATCAGTTTCGATCAACAGGCTCAAGCTCATCAAACTCATCAAGATGATTACGAGCAAGTGCCCTGCTTCTCCATTTTCTCGCAGATCCATACAAACCCTAACTTCAACCACACAAACAGCACAAGCATTATGGAGCCAAATTTAGCAGTACCTGTGAAGAATTACAATGTAACCGCCGCATACGGCGGAGGAACGACGCCGTACGATCTGGATTCTGCTTGCTTGAACCCTAATTTGAACTTCGATGGTGATAGTAGGAAGGTTTTGAAGGCTTTCGTTGATCAGATCGCGAAGATTGAGAGAAATCAACAGAGCCAAATTAGTACTCTTAAAGGTTCATCACCAAGCTTAGGGGAAGCAAGTTCTGAGAGTTTTTTATCTGATGTGTGTATGCCTAATTTGTGGAACAATTTCTGA 978 0.4693 MSSISLVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDSSLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGPLGPPKLSSAKEDWVLCRAFFKNREPSTKQSIGSCYDDTGSSSLPALMDSYISFDQQAQAHQTHQDDYEQVPCFSIFSQIHTNPNFNHTNSTSIMEPNLAVPVKNYNVTAAYGGGTTPYDLDSACLNPNLNFDGDSRKVLKAFVDQIAKIERNQQSQISTLKGSSPSLGEASSESFLSDVCMPNLWNNF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0847 325 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Mibi01g0847 325 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 218 - -
Mibi01g0847 325 FunFam NAC domain-containing protein 100-like 20 162 - -
Mibi01g0847 325 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Mibi01g0847 325 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Mibi01g0847 325 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0847 Mibi-ChrMibi01 8400844 8404790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0847 2 323 NAC Transcription Factor Family AT1G56010 57.530 2.59e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g0847 NAM 1.9e-36 No_clan