Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0844 ATGACGTCTTGTTTTTCTTGCTTATTTAGGAGGAAGTTTGCATCGTCAGTTAAAAGAGATCCTGAAATTCATGAAGAATTATCAAGGGTTCATAATGTTATTCTCTATACCTACAAAGAATTAAGTATTGCCACTGAGGATTTCAGTCCAGCCAACAAAATTGGAGAGGGAGGCTTTGGTCCTGTCTATAAGGGAAAGCTAAAAGATGGAAAAATTGCTGCTATCAAAGTCCTTGCAGCTGAGTCAAGTCAAGGGGTAAACGAATTCTTGACAGAAATCAGAGTGATCTCGGAAATAGAGCATGAAAATTTAGTTAAGTTATACGGCTGTTGTGTGGAAGGCAATCAAAGAATATTAGTCTACAATTACCTTGAGAACAACAGTCTTGCGCAAACACTTATAGGTAGACGGCGCAGCAATATTTTCTTCAATTGGAAAACACGAACTAGAATATGCATTGGAATCGCCTGCGGGCTTTCCTTTCTTCATGATGAAGTAAAACCACATATTGTTCATAGGGATATAAAAGCAAGCAACATTCTCCTTGACAAAGATCTTACACCAAAGATTTCAGATTTTGGGCTTGCAAAGCTTATCCCACCAAACATGACTCATGTCAGTACACGAGTGGCAGGGACGATAGGTTATTTGGCGCCAGAATATGCAGTAAGAGGGCAGGTGAATAGAAAATCAGACATTTATAGTTTTGGTGTACTTCTTTTGGAGATTGTCAGTGGGAGATGTAATACAAATACTCGATTGCCATTGGAAGAACAATTTCTTCTCGAAAGGACATGGAGACATTATCAGGAAAAGATATTGGTAGGGCTGGTAGACCCATCACTGAATGAAGAATTTGACGCCGAGGAAGCTTGCAAGTTTCTGAAAGTTGGCCTTCTTTGTACGCAGGAAGTTCCAAAACTCCGGCCATCCATGTCATCAGTGGTCAAGATGCTTACCGGTGAAATGGATATCGATGACATTAAGATAACAGAACCAGGTTTGATTTCCGACTTTATGGACCTCAAAGTTGGAGGGAAACCCAAGAATGAGGTTGATATGAAGACATCATCTTCATATAATGCTTCCTCTGCCTCGGACAATCAGGACACTACGATGTCATCGACTACTTCAACCACTGCTACTACAACCTTCGCCACTCTATGA 1167 0.4045 MTSCFSCLFRRKFASSVKRDPEIHEELSRVHNVILYTYKELSIATEDFSPANKIGEGGFGPVYKGKLKDGKIAAIKVLAAESSQGVNEFLTEIRVISEIEHENLVKLYGCCVEGNQRILVYNYLENNSLAQTLIGRRRSNIFFNWKTRTRICIGIACGLSFLHDEVKPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPPNMTHVSTRVAGTIGYLAPEYAVRGQVNRKSDIYSFGVLLLEIVSGRCNTNTRLPLEEQFLLERTWRHYQEKILVGLVDPSLNEEFDAEEACKFLKVGLLCTQEVPKLRPSMSSVVKMLTGEMDIDDIKITEPGLISDFMDLKVGGKPKNEVDMKTSSSYNASSASDNQDTTMSSTTSTTATTTFATL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0844 388 ProSiteProfiles Protein kinase domain profile. 48 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0844 388 FunFam cold-responsive protein kinase 1 124 335 - -
Mibi01g0844 388 Pfam Protein kinase domain 51 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0844 388 Gene3D Transferase(Phosphotransferase) domain 1 124 332 - -
Mibi01g0844 388 SUPERFAMILY Protein kinase-like (PK-like) 24 319 IPR011009 -
Mibi01g0844 388 CDD STKc_IRAK 54 321 - -
Mibi01g0844 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mibi01g0844 388 MobiDBLite consensus disorder prediction 350 388 - -
Mibi01g0844 388 MobiDBLite consensus disorder prediction 352 388 - -
Mibi01g0844 388 Gene3D Phosphorylase Kinase; domain 1 11 123 - -
Mibi01g0844 388 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 361 - -
Mibi01g0844 388 FunFam cold-responsive protein kinase 1 19 123 - -
Mibi01g0844 388 SMART serkin_6 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0844 Mibi-ChrMibi01 8367765 8370903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0844 36 325 Receptor kinase-like Gene Family AT1G53430 55.862 1.05e-107 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0844 Pkinase 6e-46 CL0016