Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0839 ATGAGTGGTATTCTTGAACGAACCAACCCATTCAAATCCCTGTTGGTGGGGTGTTTGGAATGCAGAATATGGTATCGTTGGAGAGGTTGTAGAGCAGACCTAGATTTAGATGAATTCAACGTCAGGGTTATTGAACCCATTGGCAATGGTTCTTTTCATAGGGTTTATCGTTGCCATGAAATTAACAGTAATCGAGTTGTGGCCGTTAAGGAGGTTTTCGCTGGTGACCAACATGAAGCTGTCCTCATCAATGATAGAATCTCCTTTCTCAAAGATCTCCCCCATCTCAACATCGTCAGGTTGCTGTACACATTGAAAAGGGGACGTTATCTCTATCTTGTTTTTGAGTATATCACTCCTAATCTTTACTATTTCATGAACCTACCAGCAAATTGTAAATACCCAAAACAAACAAGTCATTTGCTGTATCAAATCCTGGATGGTGTAGCACACTATCATTCCCACGGACTTCTTCTCCGAGATCTGAAACCGCAAGATTTGCTCATGGATTTTCATGATGGTTACCTCAAGATTGGTGATTTTGGTTTGTTCGGTGCATACGGAGATACTAATCCTTCTAATGTATGA 588 0.4082 MSGILERTNPFKSLLVGCLECRIWYRWRGCRADLDLDEFNVRVIEPIGNGSFHRVYRCHEINSNRVVAVKEVFAGDQHEAVLINDRISFLKDLPHLNIVRLLYTLKRGRYLYLVFEYITPNLYYFMNLPANCKYPKQTSHLLYQILDGVAHYHSHGLLLRDLKPQDLLMDFHDGYLKIGDFGLFGAYGDTNPSNV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0839 195 SUPERFAMILY Protein kinase-like (PK-like) 42 190 IPR011009 -
Mibi01g0839 195 ProSiteProfiles Protein kinase domain profile. 41 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0839 195 Gene3D Transferase(Phosphotransferase) domain 1 38 194 - -
Mibi01g0839 195 Pfam Protein kinase domain 43 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0839 195 PANTHER CELL DIVISION PROTEIN KINASE 43 183 - -
Mibi01g0839 195 SMART serkin_6 41 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0839 Mibi-ChrMibi01 8326100 8327004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0839 44 188 Core Cell Cycle Gene Families AT3G48750 39.865 4.03e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Mibi01g0839 Pkinase 3.9e-29 CL0016