Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0836 ATGGTTGGTAACGCTCAAGGAGCAATGGCTTATCTTGCTTCCCCTGTCAGTTTGGGTGGTTTAGTTGGAGTTAGTGCCTCTGGGAGGACGCACTCTATTGGAAGGAGAGTTTCTCTTTCTGGAGCAAACTTTAGAGGTAGAAGGACTTGGCATTGTGTCTCCTTGTCCCTTTGTAGATATTCAGTGACTACGACTGATTTCATACCGGACCAAGGCAATGCAGTGTCCCTTGATTCTAACAGTGATAGAGGAAGTACGGGTAATGGAGATAATAATGCTGGTTTTGTCCTTAAGCCACCTCCAAAACCGGTATTGAAGTCTTCAGAGACCATGGGCAACTCCATTTTGGGTTCAAATTCTGAAGGATGGGATCCCTCTAAAGCTCAGCAATTTGGTAATGAAAATTTAGATGATGTTGAAGAGAGGAATAAGGTGATTGAGTCACTTGGAGAGGTGTTGGAGAAAGCTGAAAAGCTGGAAAATTCAAAGGTGGAAAATAAAAGAAATAATGGACCGGTTAGCAAACCAGCAACGTCTAATACGATTACTAATCCCAAGTCTGATAAATCGGCAAACTCAACAACAAACCAGCAGTCTAGAACTGTGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCTAATGTGCCGAAGGTTGTTAAGGAAGCATCCAACCCTAAAACTAAGAATGAAGGAGGCAAAGGTCAAACAGGGGGTGGAGGTATGGCATTTCAGTCGCCTACTCCTCCACGAGCTTCTCAGCCACCATCAAGACTGCAGCCTATGTTACAAGCTAAACCATCTGCAGCTCCCCCACCTGTTAAAAAACCTATTTTGAAGGACAATGGAGCTGCTGGCACACCTGTTAAAGATAAAGAAAGGAAGCCAATCTTGATCGATAAGTTTGCTAACAAGAAACCGGTAGTTGATCCTTTAATTGCTCAACAGGTTCTAGCTCCTACAAAACCAGGAAAGGGCCCTCCTCCTGGAAGGTTTAAAGATGATTACCGAAAGAAAGGTGCTTCTACTGGAGGAGCAAGGAGAAGAGCATTAAATGATGATGCCGATGAGGATACATCAGAACTTGATGTCTCTATTCCTGGTGCTGCAACAGCAAGAAAAGGGAGGAAGTGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTTCAGGCTGCCAAGGAGGCAGCTCCTGTCAAAGTAGAAATTCTAGAGGTCAGTGATAAAGGTATGCTGATTGAGGAGTTAGCCTACAACTTGGCAATCAGTGAAGGTGAAATTCTGGGTTCTCTATACTCCAAGGGGATCAAACCAGATGGGGTACAAACTTTAGACAAAGACATGGTGAAGATGATTTGTAAAGAGCAAGGTGTGGAAGTCATAGATGCTGATCCTTTCAAAGTTGAAGGATTGGTGAAGAAAAGGGAGATTCTGGATGAAGATGATCTTGACAAACTCAAAGATAGGCCTCCTGTTATTACTATCATGGGTCATGTGGATCATGGGAAGACAACTCTTTTGGACCATATTCGGAAGAGCAAGGTAGCTGCTTCAGAAGCCGGTGGGATTACACAAGGAATTGGGGCATATAAAGTTCAAGTTCCTGTTGATGGCAAATTGCTGCCTTGTGTTTTTCTTGACACGCCTGGGCATGAGGCATTTGGAGCAATGAGAGCTCGAGGAGCAAGTGTAACAGACATTGCTATTGTTGTCGTAGCTGCTGATGATGGAATTCGTCCACAAACAAATGAAGCCATTGCTCATGCCAAAGCAGCAGGAGTACCCATAATTATCGCTATAAACAAGATTGATAAAGATGGAGCAAATCCTGACCGAGTCATGCAAGAGCTATCTTCAATTGGCCTAATGCCGGAGGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCTCTTAAAGGGGAGAATGTAGATGATCTTTTGGAAACTGTCATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCTCAAAGAGGTGCGAAGGGCACAGTCATTGAGGCTGGTCTGGATAAATCAAAAGGACCATTTGCTACTTTTATCGTGCAGAATGGCACCCTCAAAAGGGGAGATGTAGTAGTTTGCGGAGAAGCTTTTGGGAAGGTGCGGGCTTTATTTGATGACATAGGAAAACGCGTCGATTCAGCTACACCCTCTATACCTGTACAGGTTATTGGATTGAATAATGTACCGATTGCTGGTGATGAATTTGAGGTTGTTAACTCCCTTGATGCTGCCCGTGAAAAGGCAGAGTCCCGTGCTGAATCATTGAGAAATGAGCGTATTTCAGCTAAAGCAGGGGATGGGAAGATCACCCTTTCTTCTTTAGCTTCTGCAGTTTCGTCAGGAAAGCTTGCTGGATTAGACTTGCACCAACTTAACATCATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTATCAGACAAGCCCTACAGGTGCTACCACAAGATAACGTCACCTTGAAGTTTTTGTTGGAAGCAACGGGTGATGTTAGCACCAGTGATGTTGACCTTGCAGTTGCAAGCAAAGCTATTATTTTGGGATTCAATGTCAAAGTACCAGGTTCTGTAAAAAGCTACGCAGAAAATAAGCTTGTGGAGATTAGATCATATAAAGTTATTTATGACCTAATTGATGATGTGCGGAATGCAATGGAAGGACTTCTAGAGCCTGTGGAGGATCAAGTAATGATTGGCTCAGCTGAAGTAAGGGCCACGTTCAGCAGTGGCAGTGGTCGAATTGCTGGATGCATGGTTACAGATGGAAAAGTATCGAAAGACTGTGGCATTCGAGTCATTCGGAGGGGAAAGGTTATTCACGTTGGAGTGCTTGGTTCTTTGAGACGAGTGAAAGAGATTGTGAAAGAGGTAAGTGCTGGTCTAGAGTGTGGAATTGGTTTAGAAGATTATGACGACTGGGAAGAGGGAGATATTATCGAGGCATTCAACACGGTTCAGAAGAAGCGGACTCTTGAAGAGGCATCGGCTTCAATGGCTGCCGCAGTAAAAGGAGTAGAGTTGTAG 3039 0.4429 MVGNAQGAMAYLASPVSLGGLVGVSASGRTHSIGRRVSLSGANFRGRRTWHCVSLSLCRYSVTTTDFIPDQGNAVSLDSNSDRGSTGNGDNNAGFVLKPPPKPVLKSSETMGNSILGSNSEGWDPSKAQQFGNENLDDVEERNKVIESLGEVLEKAEKLENSKVENKRNNGPVSKPATSNTITNPKSDKSANSTTNQQSRTVKSVWRKGDTVANVPKVVKEASNPKTKNEGGKGQTGGGGMAFQSPTPPRASQPPSRLQPMLQAKPSAAPPPVKKPILKDNGAAGTPVKDKERKPILIDKFANKKPVVDPLIAQQVLAPTKPGKGPPPGRFKDDYRKKGASTGGARRRALNDDADEDTSELDVSIPGAATARKGRKWSKASRKAARLQAAKEAAPVKVEILEVSDKGMLIEELAYNLAISEGEILGSLYSKGIKPDGVQTLDKDMVKMICKEQGVEVIDADPFKVEGLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKSKVAASEAGGITQGIGAYKVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIVVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPDRVMQELSSIGLMPEDWGGDIPMVQISALKGENVDDLLETVMLVAELQELKANPQRGAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDVVVCGEAFGKVRALFDDIGKRVDSATPSIPVQVIGLNNVPIAGDEFEVVNSLDAAREKAESRAESLRNERISAKAGDGKITLSSLASAVSSGKLAGLDLHQLNIILKVDLQGSIEAIRQALQVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVKVPGSVKSYAENKLVEIRSYKVIYDLIDDVRNAMEGLLEPVEDQVMIGSAEVRATFSSGSGRIAGCMVTDGKVSKDCGIRVIRRGKVIHVGVLGSLRRVKEIVKEVSAGLECGIGLEDYDDWEEGDIIEAFNTVQKKRTLEEASASMAAAVKGVEL 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0836 1012 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 166 1002 IPR015760 -
Mibi01g0836 1012 PRINTS GTP-binding elongation factor signature 557 568 IPR000795 GO:0003924|GO:0005525
Mibi01g0836 1012 PRINTS GTP-binding elongation factor signature 489 502 IPR000795 GO:0003924|GO:0005525
Mibi01g0836 1012 PRINTS GTP-binding elongation factor signature 541 551 IPR000795 GO:0003924|GO:0005525
Mibi01g0836 1012 PRINTS GTP-binding elongation factor signature 593 602 IPR000795 GO:0003924|GO:0005525
Mibi01g0836 1012 Gene3D Translation factors 661 776 - -
Mibi01g0836 1012 MobiDBLite consensus disorder prediction 166 205 - -
Mibi01g0836 1012 TIGRFAM small_GTP: small GTP-binding protein domain 487 648 IPR005225 GO:0005525
Mibi01g0836 1012 CDD mtIF2_IVc 904 986 - -
Mibi01g0836 1012 MobiDBLite consensus disorder prediction 313 367 - -
Mibi01g0836 1012 MobiDBLite consensus disorder prediction 72 92 - -
Mibi01g0836 1012 CDD IF2_mtIF2_II 665 759 IPR044145 -
Mibi01g0836 1012 Gene3D Translation factors 899 995 - -
Mibi01g0836 1012 FunFam Translation initiation factor IF-2 482 660 - -
Mibi01g0836 1012 SUPERFAMILY Translation proteins 662 745 IPR009000 -
Mibi01g0836 1012 Gene3D - 793 897 IPR036925 -
Mibi01g0836 1012 SUPERFAMILY Translation proteins 900 994 IPR009000 -
Mibi01g0836 1012 Coils Coil 744 771 - -
Mibi01g0836 1012 FunFam Translation initiation factor IF-2 793 898 - -
Mibi01g0836 1012 Pfam Elongation factor Tu GTP binding domain 490 650 IPR000795 GO:0003924|GO:0005525
Mibi01g0836 1012 TIGRFAM IF-2: translation initiation factor IF-2 407 996 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mibi01g0836 1012 FunFam Translation initiation factor IF-2 661 779 - -
Mibi01g0836 1012 ProSitePatterns Initiation factor 2 signature. 947 969 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mibi01g0836 1012 CDD IF2_eIF5B 488 654 - -
Mibi01g0836 1012 Pfam Translation-initiation factor 2 793 886 IPR023115 -
Mibi01g0836 1012 Gene3D - 482 660 IPR027417 -
Mibi01g0836 1012 MobiDBLite consensus disorder prediction 327 341 - -
Mibi01g0836 1012 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 792 904 IPR036925 -
Mibi01g0836 1012 FunFam Translation initiation factor IF-2 899 995 - -
Mibi01g0836 1012 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 485 658 IPR000795 GO:0003924|GO:0005525
Mibi01g0836 1012 MobiDBLite consensus disorder prediction 107 133 - -
Mibi01g0836 1012 MobiDBLite consensus disorder prediction 72 139 - -
Mibi01g0836 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 660 IPR027417 -
Mibi01g0836 1012 MobiDBLite consensus disorder prediction 160 291 - -
Mibi01g0836 1012 Hamap Translation initiation factor IF-2 [infB]. 27 994 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0836 Mibi-ChrMibi01 8304821 8312504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0836 464 884 Eukaryotic Initiation Factors Gene Family AT1G76810 29.615 2.85e-29 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0836 01 8304821 8312504 Mibi01g0836 01 8304821 8312504 ECH