Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0833 ATGGCAATTGGGCTGGATTGTAATGTCCATAAACGGTTTTGCTGGATGCTGATATTTTGTTTTGGCATCGTCCTTGTGTGTTCGATTAATGAAGATGGTTCTAATCTTTTGGAGTTCAAAGCTTCTCTTGTTGATCCACTGAATAATCTTCACAGCTGGAATTCTTCTGATTTTACTCCTTGCAATTGGAAAGGAGTGCATTGTGATGATTCAATGGTGACTTCCTTAGATCTTCATAAGCTCAATCTTTCTGGTGCTTTATCTCCTAGCATTTGTAACCTTTCACGGCTAGTTGAGTTGAATGTGTCCAAGAATTTCATTTCTGGTCCTATTCATGTGGATTTTGTTAACTGTCGTAGTTTAGAGATATTAGACCTTTGCACGAATAGGTTCCACGGAGAACTTCTGATTCCTTTCACCAAGATCACCACACTAAGAAAGCTTTCCCTCTGTGAAAATTATATGCATGGTGAAGTGCCTGAAGAGATTGGGAATTTAACTTCACTTGAAGAGCTAGTCATTTATACCAACAACTTGACTGGCAAAATTCCCACTTCAATCGGTAAGTTGAAGCAGCTTAAGATCATCAGGGCAGGTGTTAATAGCATCTCAGGTCCAATACCGGCAGAAATAAGCCAGTGCAAGAGCTTGCAGATATTAGGATTTTCACAGAATCAGCTAGAAGGGTCCATTCCAAGGGAGATTCAAAAGCTTCAGAACCTTACTGAGTTGAACCTGTGGCAAAACTATTTATCTGGTGAGATTCCTCCCGAGATTGGAAATCTTAGTAGCCTGCAATCGCTTGCTTTGCATCACAATTCATTTGGTGGATCTCTCCCCAAGGAGCTGGGAAAGTTATCCAATTTACTAAAGTTGTACATATACACTAACCACTTGAATGGCTCGATTCCAGTGGAGCTAGGGAACTGCACAAATGCTATTGAGATAGACCTGTCTGAAAACCGTTTGAGTGGAAATATTCCCAAAGAGTTGGGCCAAATCTCTGGTCTTATATTGCTTCATCTATTTGAAAACTTTCTGCAGGGAGAGATACCTCAGGAGCTTGGGAAGCTAAAGCTGTTAAAGAATTTAGACCTGTCTATAAATAACTTAGCAGGTACAATTCCACCAGTGTTTCAAAATCTTACTTACATGGAGGATTTGCAGCTATTTGATAATCGACTTGAGGGTAAAATTCCTCCTTACCTTGGATCTAATAGCAACCTTACAGTTCTTGATATATCTACAAATAATCTTGTTGGTATGATACCTCCCCATCTTTGCCACAATCAGAAGTTGCAGTTCCTGAGCCTTGGGACAAATAAGTTGCTTGGCAATATTCCAGATGACCTTAAAATGTGCAGGCCTCTTGTGCAGCTAATGCTGGGAGACAACCTACTGACAGGAAGCTTCCCTGTTGAATTACATGAACTTCATAATCTTTCCGCTCTCGAACTTCATCAGAACCGATTCTCTGGGCTAATTGACCATGGGATAGGTCGACTCAAGAATTTAAAGAGGCTCCTCTTATCGGATAACTATTTTGTAGGTTATCTTCCTCCTGAAGTTGGAAATTTAACACAGCTTGTCGCTTTCAACATTTCCTCTAATTTTCTCAGTGGAAGCATACCTCATGAGTTGGGAAACTGCATCAAACTCCAGAGGCTTGATCTGAGTAGAAATAAGTTCACTGGTGATCTTCCAGACGATATCGGCAAGCTGGTGAATCTAGAGCTGTTAAAACTTTCTGATAATAGACTATCCGGAACGATACCAAGTGCTTTAGGGAACCTTTCACGTCTCACAGATTTGGAGCTTGGGGGAAACTTTTTAGTTGGGAGCATTCCTCTTCATTTAGGACAATTAGCTGCTCTTCAGATTGCTCTTAACTTGAGTTATAATCAACTTTCTGGTACCATTCCTGACAGCCTTGGGAGCTTGCAAATGCTGGAAAGTCTTTATTTAAATGATAATCAGCTTGTTGGTGAAATTCCTGCATCAATTGGTGAACTTCCCAGCCTCTTAGTGTGCAACGTTTCCAACAATAAACTGGTAGGGGTCATTCCAGACACACCAGCATTTCGTAAGATGAATTTTACTAATTTTGCTGGAAACAATGGGTTGTGTCGAGTAAGTTCATATTATTGTCATCCCTCTCGTACTCCAGTCTGGACCAGAGATGGTTCAACAAAACAAAAGATAGTGAGCATTGTTTCTGGGGTGGTGGGATGTGTTTCTCTTATTTTCATAGTCTGTATATGTTGGGCTATGAAACGTCGTAGCATTTCTTTTGTCTCAATTGAAGGGCAATCAAAGCCCCATGTCTTAGATAACTATTACTTTCCTAAAGAAGGTTTCAAGTACCAGGATCTCTTGGAAGCCACTAGCAATTTTTCAGAAGCATTAGTTATAGGAAGAGGAGCTTGTGGGACTGTCTACAAGGCTGTTCTTACTGATGGTGAGGTGATAGCAGTCAAAAAGCTGAATTCTCGTGGAGAAGGAGCAAGTGTGGACAGAAGTTTCCTTGCAGAAATTTCAACTCTGGGAAAGATCAGGCATAGAAATATTGTGAAGCTGTTTGGATTCTGTTGTCATGAGGATTCAAATATTCTCTTGTATGAATTCATGGAAAATGGCAGCCTTGGTGAGCAACTTCATTCAGATCCGGACATGTGCATATTGGGTTGGAGTAGTCGCTACAAAATTGCTCTTGGAGCAGCAGAAGGCTTGTGTTATCTTCATTATGATTGTAAACCTCAAATCATCCATCGTGATATAAAGTCAAACAATATATTGCTCGATGAAGTGTATCAGGCTCATGTTGGAGACTTTGGCCTGGCTAAGTTGGTGGATTTTTCCTACTCTAAATCAATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCTCCTGAATATGCTTACACCATGAAGGTGACTGAGAAATGCGACATATATAGCTTCGGGGTAGTTTTGCTGGAACTAGTCACTGGGAGGTCACCTGTTCAACCTTTGGAGCAAGGTGGTGACCTAGTTAGTTGGGTGAGAAGATCAATTCAAGCGTCAGTGCCAACATTTGAATTATTTGACAAAAGATTAAATCTGAGTGCACAAAAAACAATCGACGAGATGTCTCTCGTTCTCAAAATTGCTCTGTTTTGCACCAGTACATCCCCACTTAATAGGCCAACAATGAAAGAGGTCATAGCGATGTTGATTGATGCTAGGGAGTATGTCAACAATTCTCCATTAACTCCTACATCTGAGTCCCCACTAAATGAAGATGCTTCTTCAAAAGGTGATCTAGATTTGTGA 3312 0.407 MAIGLDCNVHKRFCWMLIFCFGIVLVCSINEDGSNLLEFKASLVDPLNNLHSWNSSDFTPCNWKGVHCDDSMVTSLDLHKLNLSGALSPSICNLSRLVELNVSKNFISGPIHVDFVNCRSLEILDLCTNRFHGELLIPFTKITTLRKLSLCENYMHGEVPEEIGNLTSLEELVIYTNNLTGKIPTSIGKLKQLKIIRAGVNSISGPIPAEISQCKSLQILGFSQNQLEGSIPREIQKLQNLTELNLWQNYLSGEIPPEIGNLSSLQSLALHHNSFGGSLPKELGKLSNLLKLYIYTNHLNGSIPVELGNCTNAIEIDLSENRLSGNIPKELGQISGLILLHLFENFLQGEIPQELGKLKLLKNLDLSINNLAGTIPPVFQNLTYMEDLQLFDNRLEGKIPPYLGSNSNLTVLDISTNNLVGMIPPHLCHNQKLQFLSLGTNKLLGNIPDDLKMCRPLVQLMLGDNLLTGSFPVELHELHNLSALELHQNRFSGLIDHGIGRLKNLKRLLLSDNYFVGYLPPEVGNLTQLVAFNISSNFLSGSIPHELGNCIKLQRLDLSRNKFTGDLPDDIGKLVNLELLKLSDNRLSGTIPSALGNLSRLTDLELGGNFLVGSIPLHLGQLAALQIALNLSYNQLSGTIPDSLGSLQMLESLYLNDNQLVGEIPASIGELPSLLVCNVSNNKLVGVIPDTPAFRKMNFTNFAGNNGLCRVSSYYCHPSRTPVWTRDGSTKQKIVSIVSGVVGCVSLIFIVCICWAMKRRSISFVSIEGQSKPHVLDNYYFPKEGFKYQDLLEATSNFSEALVIGRGACGTVYKAVLTDGEVIAVKKLNSRGEGASVDRSFLAEISTLGKIRHRNIVKLFGFCCHEDSNILLYEFMENGSLGEQLHSDPDMCILGWSSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVYQAHVGDFGLAKLVDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVSWVRRSIQASVPTFELFDKRLNLSAQKTIDEMSLVLKIALFCTSTSPLNRPTMKEVIAMLIDAREYVNNSPLTPTSESPLNEDASSKGDLDL 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0833 1103 Gene3D Ribonuclease Inhibitor 378 720 IPR032675 -
Mibi01g0833 1103 Gene3D Ribonuclease Inhibitor 273 377 IPR032675 -
Mibi01g0833 1103 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 720 - -
Mibi01g0833 1103 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 876 1088 - -
Mibi01g0833 1103 Gene3D Phosphorylase Kinase; domain 1 765 875 - -
Mibi01g0833 1103 SUPERFAMILY Protein kinase-like (PK-like) 775 1071 IPR011009 -
Mibi01g0833 1103 SMART LRR_typ_2 647 671 IPR003591 -
Mibi01g0833 1103 SMART LRR_typ_2 238 261 IPR003591 -
Mibi01g0833 1103 SMART LRR_typ_2 502 526 IPR003591 -
Mibi01g0833 1103 SMART LRR_typ_2 478 501 IPR003591 -
Mibi01g0833 1103 SMART LRR_typ_2 407 430 IPR003591 -
Mibi01g0833 1103 SMART LRR_typ_2 262 286 IPR003591 -
Mibi01g0833 1103 SMART LRR_typ_2 166 190 IPR003591 -
Mibi01g0833 1103 SMART LRR_typ_2 358 381 IPR003591 -
Mibi01g0833 1103 SMART LRR_typ_2 574 598 IPR003591 -
Mibi01g0833 1103 FunFam Predicted protein 185 280 - -
Mibi01g0833 1103 Gene3D Transferase(Phosphotransferase) domain 1 876 1087 - -
Mibi01g0833 1103 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 281 375 - -
Mibi01g0833 1103 MobiDBLite consensus disorder prediction 1081 1103 - -
Mibi01g0833 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Mibi01g0833 1103 Pfam Protein kinase domain 803 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0833 1103 Gene3D Ribonuclease Inhibitor 27 177 IPR032675 -
Mibi01g0833 1103 Gene3D Ribonuclease Inhibitor 178 272 IPR032675 -
Mibi01g0833 1103 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Mibi01g0833 1103 SUPERFAMILY RNI-like 363 688 - -
Mibi01g0833 1103 ProSiteProfiles Protein kinase domain profile. 798 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0833 1103 SUPERFAMILY L domain-like 31 302 - -
Mibi01g0833 1103 SMART serkin_6 798 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0833 1103 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 482 1072 - -
Mibi01g0833 1103 Pfam Leucine rich repeat 552 609 IPR001611 GO:0005515
Mibi01g0833 1103 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 28 184 - -
Mibi01g0833 1103 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 763 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0833 Mibi-ChrMibi01 8272410 8276876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0833 52 1075 Receptor kinase-like Gene Family AT1G73080 38.569 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g0833 Pkinase 2.5e-45 CL0016