Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0821 ATGGGGACATCCTATGATGAAAGCTCAGATGAGATTGGTACAGTTCAGGTTTCAGATGCTGGAAAACTTGCATTGATTGTGCTTGACCTTCGAGTAATGGCGGTAGCAACTAACAGTCAGGAGGATGCTCACGAGTTCTTGAGGTATGTTATTGATGCATGCCACAATACCTGTCTTCGCCTCAAGAAGTTGAAGCACAAGGGGGGCGATATTGCTGTGAATGGTAATGGAAGTATTAGTAATACTGTGGTTAAGGAGATATTTGGGGGAGCTTTGCAGAGCCAGGTGAAGTGTCTCTCTTGTGGCTATGAGTCTAATAAGGTGGATGAGATTATGGATACCAGTCTTGATGTTTTGCATAGCAATTCGCTTAAAGATGCTATGCAGAAGTTCTTTCAGCCTGAGATTTTAGATGAGAATAATAAGTACAAATGTGACAAGTGTTTTAGATGTGCTATTAAATTTGGTTTTTTGGATTTTCAGATATTTGGGGGCATATTGAGCGGAAAGATTGATAAGGCTGTCGCATTTGAAGACATTATGGATGCAAAGGGTCGATGGTATTGCTGTGATGATTCTTTGGTCTCACTTGCAACCCTGAAAGAAGTTTTGTCAGAAAAGGTGTACATACTTTTTTTCTCTCGCACTAACCAAAGGCCAGTGCCAACTAGAAATGGTTTTGCCTCGAATGGTTCAAGGTCTCATGACTCTCATCACGTCAATGGAAGCCAGGCATCTGAATGTCCAAAATCTGATGCGCCACCGAAAGTAGTGCATGCAAAATTAAATTCTCAACAATCTTCTTGGAAGGACATGTCTGCCATGCCTAAGACTAATAAAGAGCTTTCTAGCCCGCGAATAAAGTTTAAATTTAATGGAAATTCTACATCCAAAAGAGGCTGTGAAGGTTTGAATGGGAAAGTTGATGGTCCGTTGAACCAGCCTGTTGTAACTAATGGACATGTAAAAGACTCAGTTGCCTTGGAGAATGCTAAGAAAGATTCTTCAACATTTAGTAGTGGTTTTGATAAAAATAAAGTAGATGCTGTTGACAACCTAAAAAGGAAGTATCCATTTTTAACAAATAAAAACAACGGTATTCATTCTGTTGAAAAACATCCTAGAAAGTCAGATCTTATGGATGGCACTGGAAGAAGCAGAGCAATATCAGTTAATGGACCTGACAGCTACAAGCTAGAAGGCATTGGTCTCAACAAAAAACCTAAATCATTGGAGAATAGGGGGAAGGAACCAGTGCCAACGAGTAGTTTGCTTGCACATCATGATCAATCTGAAGCAAGAGTTCAGGAACTGAAAGACATGTATGATATGCCTTAG 1338 0.4006 MGTSYDESSDEIGTVQVSDAGKLALIVLDLRVMAVATNSQEDAHEFLRYVIDACHNTCLRLKKLKHKGGDIAVNGNGSISNTVVKEIFGGALQSQVKCLSCGYESNKVDEIMDTSLDVLHSNSLKDAMQKFFQPEILDENNKYKCDKCFRCAIKFGFLDFQIFGGILSGKIDKAVAFEDIMDAKGRWYCCDDSLVSLATLKEVLSEKVYILFFSRTNQRPVPTRNGFASNGSRSHDSHHVNGSQASECPKSDAPPKVVHAKLNSQQSSWKDMSAMPKTNKELSSPRIKFKFNGNSTSKRGCEGLNGKVDGPLNQPVVTNGHVKDSVALENAKKDSSTFSSGFDKNKVDAVDNLKRKYPFLTNKNNGIHSVEKHPRKSDLMDGTGRSRAISVNGPDSYKLEGIGLNKKPKSLENRGKEPVPTSSLLAHHDQSEARVQELKDMYDMP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0821 445 Pfam Ubiquitin carboxyl-terminal hydrolase 36 108 IPR001394 GO:0004843|GO:0016579
Mibi01g0821 445 MobiDBLite consensus disorder prediction 430 445 - -
Mibi01g0821 445 SUPERFAMILY Cysteine proteinases 35 215 IPR038765 -
Mibi01g0821 445 MobiDBLite consensus disorder prediction 364 383 - -
Mibi01g0821 445 MobiDBLite consensus disorder prediction 368 382 - -
Mibi01g0821 445 MobiDBLite consensus disorder prediction 222 255 - -
Mibi01g0821 445 MobiDBLite consensus disorder prediction 388 445 - -
Mibi01g0821 445 Gene3D Cysteine proteinases 24 156 - -
Mibi01g0821 445 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 37 150 - -
Mibi01g0821 445 MobiDBLite consensus disorder prediction 222 248 - -
Mibi01g0821 445 Gene3D Cysteine proteinases 168 224 - -
Mibi01g0821 445 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1 216 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0821 Mibi-ChrMibi01 8132566 8136355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0821 40 225 Miscellaneous Gene Families AT2G24640 28.750 3.83e-24 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0821 01 8132566 8136355 Mibi01g0821 01 8132566 8136355 ECH