Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0744 ATGGAGGGCACAGGCATGGAAGGTCCGATTCCTTCTACCATATCGTTGTTGACAAATTTGAAAGAATTACATTTTGATATTAGGAGAATATCCGACTTGCAAGGAACAACAACTATGACATTTCCTAATCTGCAGAACTTGACGAGTTTGGAACGACTGGACCTGAGCTTTAACATGTTGGCTGGTCCAATCCCTGGCTCATTTCAGAACTTAACTCTTATTAATCACATGTTTCTGACAAACAATTCCCTCAGTGGAGCGATTCCAGAATTGGGTTTTAAATACTTGAAAGATTTTAACATTGCAAAGGAAGCTGGTGGAGTTGGTAAGGGCATCTCTAAGGTATTTGATGTTGATGTGAATGATAGCACCTTGGAAATTCATTTATATTGGGCAGGGAAAGGAACTACAGCGATTCCCACTAGAGGTGTATATGGACCTCTAATATCTGCCATCACTGTGACCCCAAACTTCAAAATTCCCTCAAAAGGATTGCCTGTTGGCTTTATTGTTGGAATTGTGATTGGATCAAGCGCCTTCCTTGTTCTTGTATTATTTGTCCTCAGAAAAATCGGTTTTCTTGGGGGGGAAGATCCAAAAGACAAAGAACTTTTAGATTTAAAGACCGGTTATTTTTCTCTAAGACAAATTAAAACTGCAACTAATGACTTTGACCCTGCAAATAAGATAGGAGAAGGTGGCTTCGGGCCAGTGTATAAGGGTATGTTGTCCGATGGTCTTGTCATCGCTATTAAGCAGCTCTCTTCCAGATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATAGGAATGATATCTGCTTTGCAACATCCAAATCTTGTGAAGCTTTATGGTTGTTGCATCGAAGGAAATCAATTGTTGCTTGTATATGAATACATGGAGAACAATAGTCTTGCTCGAGCACTTTTTGGTGATGATGGACAAAGGATACACTTGGACTGGCCCACAAGAGTAAAGATTTGTCAAGGGATAGCGAGGGGATTGGCTTATCTTCATGAGGAATCGAGGTTGAAGATAGTACATAGAGACATCAAGGCAACAAACATCTTACTTGATAAAGATTTGAATGCCAAAATCTCTGATTTTGGTTTAGCAAAGCTTGATGATCAAGAAAATACCCACATCATCACTCGAGTTGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGAGAGGTTACTTAACAGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTATTTTGGAGATTGTCAGTGGAAAGAGTAACGCTAATTGCATACCAATGGATGACTTTGTTCATCTTCTTGATTGGGCCTATGTTCTCCATGAGCAAGGAAAGCTTCTAGAATTGGTGGATCCACTTCTTGGTTCAAGCTACTCCCAAGATGAGGCCATAAGAATGCTAAATTTGGCTCTTTTGTGCACTAATCTATCTCCCACCCTCAGACCCTCCATGTCATCTGCAGTGACCATGCTTGAGGGAAAAGCTCCAATCCAGGCACCGATAAACAAGAACAAAAATCAAGATGCAAGGTTCAAAGCCTTTGAGATGCTGTCATATGACAGCCATACAACTATAACCTCTCAAGGAAGCATGGAACAGAGAGGGAAGTCAATGGATGGACCATGGGTTGACTCCTCAATATCTCTTCCAAGTAACGACGATTTTTCTTCATCTAGTAAGCTTCTTGAAGATTGA 1707 0.4036 MEGTGMEGPIPSTISLLTNLKELHFDIRRISDLQGTTTMTFPNLQNLTSLERLDLSFNMLAGPIPGSFQNLTLINHMFLTNNSLSGAIPELGFKYLKDFNIAKEAGGVGKGISKVFDVDVNDSTLEIHLYWAGKGTTAIPTRGVYGPLISAITVTPNFKIPSKGLPVGFIVGIVIGSSAFLVLVLFVLRKIGFLGGEDPKDKELLDLKTGYFSLRQIKTATNDFDPANKIGEGGFGPVYKGMLSDGLVIAIKQLSSRSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGDDGQRIHLDWPTRVKICQGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDDQENTHIITRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVILEIVSGKSNANCIPMDDFVHLLDWAYVLHEQGKLLELVDPLLGSSYSQDEAIRMLNLALLCTNLSPTLRPSMSSAVTMLEGKAPIQAPINKNKNQDARFKAFEMLSYDSHTTITSQGSMEQRGKSMDGPWVDSSISLPSNDDFSSSSKLLED 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0744 568 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 196 299 - -
Mibi01g0744 568 FunFam Putative LRR receptor-like serine/threonine-protein kinase 300 507 - -
Mibi01g0744 568 Pfam Malectin domain 96 152 IPR021720 -
Mibi01g0744 568 Gene3D Transferase(Phosphotransferase) domain 1 300 520 - -
Mibi01g0744 568 MobiDBLite consensus disorder prediction 529 568 - -
Mibi01g0744 568 CDD STKc_IRAK 230 497 - -
Mibi01g0744 568 Gene3D Ribonuclease Inhibitor 1 94 IPR032675 -
Mibi01g0744 568 Gene3D Phosphorylase Kinase; domain 1 196 299 - -
Mibi01g0744 568 SMART serkin_6 224 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0744 568 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 96 524 - -
Mibi01g0744 568 SUPERFAMILY Protein kinase-like (PK-like) 208 496 IPR011009 -
Mibi01g0744 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Mibi01g0744 568 SUPERFAMILY L domain-like 7 90 - -
Mibi01g0744 568 Pfam Protein tyrosine and serine/threonine kinase 228 469 IPR001245 GO:0004672|GO:0006468
Mibi01g0744 568 Gene3D - 95 157 - -
Mibi01g0744 568 ProSiteProfiles Protein kinase domain profile. 224 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0744 Mibi-ChrMibi01 7106878 7111372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0744 1 91 Receptor kinase-like Gene Family AT1G53440 43.103 1.82e-17 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0744 PK_Tyr_Ser-Thr 4e-49 CL0016