Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0743 ATGCCCACGTGTTTGAGCAGCTGTTCTGAAATATTATCTCGCTCTCTCTATATAAATTGTGGTGGAAGCCCGATAACCGTGAATGGAAATAAAAGATATGAAGGTGATTCTGATGATGAAGCTGGATCGGCCAGATTCTACAACCACAAAAACTGGGCACTCAGCAGAACTGGCTATTACATGGATAATAATACTGAACAATATACCTGTTCAAACCAGTCTAGGCTTTCTATGACCGATGCTGAACTGTATATGAATGCCCGCATTTCTCCAATTTCTGTGACTTATTTTGGGGTTTGCCTCGAAAATGGAAGATACAGAGTGAACCTCCATTTTGCTGAGATAATGTTTACTGATGATCAAACATATAGCAGCCTTGGAAGGCGTTTATTTGACGTCTACATTCAGGGAGAGAGGGTGCGAGAGAACTTCAACATTGCTGAAGAAGCAGGAGGAGTAGGGAAGGCGGTCATAATATCATTCCCTGCTGATGTCACCCATAATACGTTGGAGATTAGATTGTATTGGGCTGGGAAAGGGACAACTGCTATCCCATACAAATCAGTATACGGTCCTCTTATATCTGCTATATCTGTGGAACCTGGTGGGTTGCACAGTACACTAGAGGTTTTAATTAATTTTCTGTCACCATCTGGTGACTTTCCAGAAGATGGACTATCTACGGGGGCTGTGGTAGGAATCGTGTTTGCAGGAGCTGTTATTGTGATCTTGGTATTTGGTATACTTTGGTGGAGAGGCTGTATAGGGCACAGAAGTTCATTGGTTAAAGATCTTGAGGGTTTGGATCTTAGAACTGGTATATTCACTTTCAAGGAAATCAAAGCAGCAACCGACAACTTTAATATAGCTAATAAGATCGGAGAAGGAGGGTTCGGTCCTGTTTATAAGGGTACTCTTCCAAATGGCACAATAATTGCAGTTAAGCAATTATCTACCAAGTCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATAGGCATGATTTCAGCTTTGCAGCACCCCTATTTTGTTAAGCTTTATGGCTGTTGTGTTGAAGGTGATCAATTGCTGTTGATATATGAATTCATGGAGAACAATAGTCTTGCTCGTTCAGATGAATTCCGATTAAAATTAGATTGGCCAACAAGACACCAGATCTGTGTTGGGATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTGAAGATTGTTCATAGAGACATTAAGGCCACTAATGTGCTACTTGATGAAGATCTCAACCCCAAGATATCAGATTTTGGTTTGGCTAAGCTTGTTGAAGAGGACAATACACACATAAGCACTCGAATTGCTGGCACTTATGGATATATGGCACCTGAATATGCAATGCATGGTTATTTAACTGACAAGGCAGATGTCTACAGTTTTGGAATTGTTGCATTGGAAATTGTGAGTGGGAGGGTCAACACCATTCACCGGGCAAAGGAGGAAGCAATCTATCTGCTTGACTGGGCACGTATCTTGAAAGAAAAAGGAGAATTACTGGAGCTAGTTGATCCAAGGTTGGGATCAAACTTTGATAAGGAAGAAGCAATAGTGATAATCAAAGTGGCTCTCCTATGCACCAAGGTGATGCCAGCTCTGAGGCCTACCATGTCTTCAGTGGTAAGCATGCTTGAAGGTAAAAGTGTGGTTGTGGAGATAGTTTCAGAGTCAAGTGAGGTATTGGATGAGAAGAAGTTGGAAACAATGAGGATGTTATACAGACAGATGGAAGAAGATAACGTAACAGAGATTCATGAACAAGGCACATCAGTGGACGAACTGTGTGCTGCTTCTTCAACATCAGCATCAGATCTCTACCCTCTTCATCTGGACTCCTCTTACTGGGATAAAAGAGATCATTAA 1893 0.4142 MPTCLSSCSEILSRSLYINCGGSPITVNGNKRYEGDSDDEAGSARFYNHKNWALSRTGYYMDNNTEQYTCSNQSRLSMTDAELYMNARISPISVTYFGVCLENGRYRVNLHFAEIMFTDDQTYSSLGRRLFDVYIQGERVRENFNIAEEAGGVGKAVIISFPADVTHNTLEIRLYWAGKGTTAIPYKSVYGPLISAISVEPGGLHSTLEVLINFLSPSGDFPEDGLSTGAVVGIVFAGAVIVILVFGILWWRGCIGHRSSLVKDLEGLDLRTGIFTFKEIKAATDNFNIANKIGEGGFGPVYKGTLPNGTIIAVKQLSTKSKQGNREFVNEIGMISALQHPYFVKLYGCCVEGDQLLLIYEFMENNSLARSDEFRLKLDWPTRHQICVGIARGLAYLHEESRLKIVHRDIKATNVLLDEDLNPKISDFGLAKLVEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRVNTIHRAKEEAIYLLDWARILKEKGELLELVDPRLGSNFDKEEAIVIIKVALLCTKVMPALRPTMSSVVSMLEGKSVVVEIVSESSEVLDEKKLETMRMLYRQMEEDNVTEIHEQGTSVDELCAASSTSASDLYPLHLDSSYWDKRDH 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0743 630 Gene3D - 15 202 - -
Mibi01g0743 630 SMART serkin_6 287 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0743 630 FunFam Putative LRR receptor-like serine/threonine-protein kinase 363 566 - -
Mibi01g0743 630 ProSiteProfiles Protein kinase domain profile. 287 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0743 630 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 584 - -
Mibi01g0743 630 Pfam Protein kinase domain 288 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0743 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Mibi01g0743 630 CDD STKc_IRAK 293 556 - -
Mibi01g0743 630 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 13 202 - -
Mibi01g0743 630 Gene3D Phosphorylase Kinase; domain 1 257 362 - -
Mibi01g0743 630 Pfam Malectin domain 16 197 IPR021720 -
Mibi01g0743 630 Gene3D Transferase(Phosphotransferase) domain 1 363 575 - -
Mibi01g0743 630 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 256 362 - -
Mibi01g0743 630 SUPERFAMILY Protein kinase-like (PK-like) 271 559 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0743 Mibi-ChrMibi01 7100557 7105817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0743 15 614 Receptor kinase-like Gene Family AT1G53420 57.213 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0743 Pkinase 7.6e-48 CL0016