Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0742 ATGTCACTTGCGATTGCACTTTCCAAAGCGGCACCGTTTGCCATGTCACTCATATTGACTCAACAATTTGTGTTTGGTAGTGTGTTGAAAGGCCGGAATATAGCAGGAGAAATACCCAGTGAATTTGGAAATCTTACACAACTGATTGAACTTGATCTCACTCGCAACTATCTCAGTGGCACTATCCCAACAGTTTTTACACGCACCTCTCTTCAAATTCTGGCCCTTTTGGGGAATAAACTCAATGGTTCAATTCCAGAAGAATTGGGTGAAATTGCTACTCTGCAGGAGCTGGTCTTAGAAGATAATCAGCTTGGAGGACCTCTTCCTCAGAGTCTTGGAAGTTTGAGCAACCTTCGGAGATTACTTCTTTCTGGAAATAACTTTACCGGGATCATACCAGAAACGTTTGGACATCTAAAGAATCTAACTCAGTTTAGGATAGATGGGAGCAGTTTATCAGGGAAGATACCCAGTTTTATTGGGAACTGGACCAAAATTAATATTCTGAATATGCAAGGCACAGGCATGGCAGGTCCAATTCCTCCCACCATATCCTCGCTGACAAATTTGACAGAATTGAGAATATCGGACTTGAGTGGAACAACAACCATGACATTTCCTGATCTCAAGGATTTGAAGATTTTGGAACGCCTGGTATTGAGAAATTGTTTAATTGTTGGTCGCATTCCAGATGATTTCGGCCAAATGACAAAGCTAAAGACTCTAGACTTGAGCTTTAATATGTTGAATGGTTCAATCCCTCCTTCACTTGAGCCCTTGCAGTTCAATCAAATGTTTCTGACAAACAATTCTCTTAGTGGTGCAATTCCAGAGTGGATGCTAAGTAGCAAAGAAAATATTGATTTATCTTATAACAATTTTACTGAGGCTTCTGCAACTACTTGCCAGCAGTTGAACGTGAACTTGGCTTCTAGTCTCTCATCTTCAGCAAGCAATTCACTCTTCTGTTTGAAGAAGGGCCTAACCTGTGAGGGAAATCCAAAATATCATTCATTGTTCATAAACTGTGGAGGAGGCAAGATGGAGTTCGAGGGTCAAGTATATGAGGAGGATTTAAATCGAAATGGCATGTCATTTTTTAATCTTCAAAACAACTGGGCTTATAGCAGCACAGGACTATATATGAATAATGATTCTACTAGTTTTGTGGCGACAAATTCATCTTCATTGAATGCTAGTTGTCCAGAATACTGCCAATCCGCCCGCCTTAGCCCTCTTTCGCTCAAGTACTATGGCCTATGTATGATGCAAGGCAATTATACAGTAAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACATATAGCAGTCTTGGTAGACGCATATTTGATGTTTCAATTCAAGGTGTCAAATACTTAAAAGATTTTAACATTGCGGAGAAAGCCCATGGAGTTGGTAATGGCATCACAAGGGAATTTAATGTTAATGTGAACGATAGCACCTTGGAGATCCATTTATACTGGGCTGGGAAAGGAACTACTGCGATTCCCTATAGAAATGTATACGGACCCCTAATATCTGCTATCACTGTGACCCCAAATTTCAAGATTCCTTCAAAAGGGTTGTCCACTGGAGCCATTGTAGGAATTGTGGTTGGATCATGTGTTTTCCTCGTATTGGTACTCATTGTCCTCCGAAAGAAAGGTTTCCTTGGTGGGGAAGATCCAAAAGACAGAGAGCTTCTAGATCTTAAGACAGGCTATTTTCCCATAAGACAAATTAAAACAGCCACCAATAACTTTGACCCAGCAAATAAGATAGGAGAAGGAGGATTTGGGCCTGTGTATAAGGGTGTGCTGTCAGATGGTGTAGTTATTGCTGTTAAGCAGCTCTCTTCCAAGTCAAAGCAAGGGAATAGAGAATTTGTTAATGAGATAGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAGCTTTATGGATGTTGCATAGATGGAAATCAACTAATGCTTATATATGAATACATGGAGAACAACAGTCTTGCTCGAGCACTTTTTGGCCCTGAAGAACACAGGATACACTTGGATTGGCCCACAAGATTGAAGATTTGTAAGGGGATAGCAAGGGGATTAGCTTACCTACATGAGGAGTCGAGATTGAAAATAGTACACCGGGACATTAAGGCGACGAACGTCTTACTTGATAAGGATCTAAATGCCAAAATTTCTGACTTTGGTCTAGCAAAGCTTGATGAAGAAGAAAATACTCATATCAGCACCAGAATAGCTGGAACAATTGGTTACATGGCCCCGGAATATGCAATGAGAGGCTATTTGACGGACAAAGCAGATGTTTATAGCTTTGGAGTGGTTGTTTTGGAGCTTGTTAGTGGAAAGAACAATATGAATTACCGGCCAAAGGAGGAGTTTGTTCATCTTCTTGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAACTGGTGGATCTGCGTCTTGGTTCAAGCTACCCCCAAGATGAGGCCATGAGAATGCTCAATTTGGCTCTTCTGTGTACCAACCCATCTCCCTCCCTCAGACCAGCCATGTCATCTATAGTGAGCATGCTTGAAGGAAATATGCCAATTCAACCTCCAATAATCAAACGCAAAGAGTCAAGCCAGGATCAAGATGCGAGGTTCAAAGCCTTGGAGATGCTTTCACATGACAGCCAAACATCTATAGCCTCTCAAGTAAGTATAGAGCAAAGAGGCAAGTCAATGGATGGGCCATGGGTTGATTCCTCAATATCTCTTCCAAGTGGAGATGACTATTCTTCATCTAGGAGGCTTCTTCGAGATTGA 2820 0.4138 MSLAIALSKAAPFAMSLILTQQFVFGSVLKGRNIAGEIPSEFGNLTQLIELDLTRNYLSGTIPTVFTRTSLQILALLGNKLNGSIPEELGEIATLQELVLEDNQLGGPLPQSLGSLSNLRRLLLSGNNFTGIIPETFGHLKNLTQFRIDGSSLSGKIPSFIGNWTKINILNMQGTGMAGPIPPTISSLTNLTELRISDLSGTTTMTFPDLKDLKILERLVLRNCLIVGRIPDDFGQMTKLKTLDLSFNMLNGSIPPSLEPLQFNQMFLTNNSLSGAIPEWMLSSKENIDLSYNNFTEASATTCQQLNVNLASSLSSSASNSLFCLKKGLTCEGNPKYHSLFINCGGGKMEFEGQVYEEDLNRNGMSFFNLQNNWAYSSTGLYMNNDSTSFVATNSSSLNASCPEYCQSARLSPLSLKYYGLCMMQGNYTVKLHFAEIMFSDDQTYSSLGRRIFDVSIQGVKYLKDFNIAEKAHGVGNGITREFNVNVNDSTLEIHLYWAGKGTTAIPYRNVYGPLISAITVTPNFKIPSKGLSTGAIVGIVVGSCVFLVLVLIVLRKKGFLGGEDPKDRELLDLKTGYFPIRQIKTATNNFDPANKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLIYEYMENNSLARALFGPEEHRIHLDWPTRLKICKGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVVLELVSGKNNMNYRPKEEFVHLLDWAYVLQEQGNLLELVDLRLGSSYPQDEAMRMLNLALLCTNPSPSLRPAMSSIVSMLEGNMPIQPPIIKRKESSQDQDARFKALEMLSHDSQTSIASQVSIEQRGKSMDGPWVDSSISLPSGDDYSSSRRLLRD 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0742 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Mibi01g0742 939 Gene3D Transferase(Phosphotransferase) domain 1 667 885 - -
Mibi01g0742 939 FunFam Putative LRR receptor-like serine/threonine-protein kinase 667 874 - -
Mibi01g0742 939 Pfam Protein tyrosine and serine/threonine kinase 595 862 IPR001245 GO:0004672|GO:0006468
Mibi01g0742 939 SMART serkin_6 591 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0742 939 SUPERFAMILY L domain-like 29 256 - -
Mibi01g0742 939 Gene3D Ribonuclease Inhibitor 203 340 IPR032675 -
Mibi01g0742 939 SUPERFAMILY Protein kinase-like (PK-like) 576 879 IPR011009 -
Mibi01g0742 939 MobiDBLite consensus disorder prediction 910 939 - -
Mibi01g0742 939 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 133 200 - -
Mibi01g0742 939 CDD STKc_IRAK 597 864 - -
Mibi01g0742 939 Pfam Leucine rich repeat 94 151 IPR001611 GO:0005515
Mibi01g0742 939 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 337 524 - -
Mibi01g0742 939 SMART LRR_typ_2 116 139 IPR003591 -
Mibi01g0742 939 SMART LRR_typ_2 45 68 IPR003591 -
Mibi01g0742 939 SMART LRR_typ_2 237 261 IPR003591 -
Mibi01g0742 939 Gene3D - 341 524 - -
Mibi01g0742 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 29 896 - -
Mibi01g0742 939 ProSiteProfiles Protein kinase domain profile. 591 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0742 939 Gene3D Phosphorylase Kinase; domain 1 564 666 - -
Mibi01g0742 939 Gene3D Ribonuclease Inhibitor 26 108 IPR032675 -
Mibi01g0742 939 Pfam Leucine Rich Repeat 239 260 IPR001611 GO:0005515
Mibi01g0742 939 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 563 666 - -
Mibi01g0742 939 Pfam Malectin domain 340 519 IPR021720 -
Mibi01g0742 939 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 114 144 IPR000225 GO:0005515
Mibi01g0742 939 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 109 - -
Mibi01g0742 939 Gene3D Ribonuclease Inhibitor 109 202 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0742 Mibi-ChrMibi01 7062726 7068869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0742 29 928 Receptor kinase-like Gene Family AT1G53440 64.270 0.0 1171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0742 PK_Tyr_Ser-Thr 6.5e-51 CL0016