Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0736 ATGAATCTTGAATTCATGGACATCAGTAACAATAATATCAGTGGAGCAATTCCATCAAGTTTAGGGAACTGCAAAAACCTCACTGATATTAACTTGTCCATGAACAAACTTTCAGGGTTCATACCCTCAGAGCTAGGGAAACTCGAGAATCTTCGGAAGTTGAATCTTTCTGACAACAATTTGCAAGGTCCTTTGCCTCCTCTCTTGTCAAATTGTATCAAAATGGAATACTTTGATGTAGGATTTAATAACCTAAACGGCTCATTTCCTTCAAGTTTGAGAAAATGGACAGGGCTAGCAACTTTGGTCTTAAGAGATAATCATTTCACTGGAGGCATCCCAACATTCTTAACAGAATTTGAAATGCTTTCTGAGCTACAACTTGGTGGCAATGCATTTGGAGGTGGAATTCCTAACTTAATTGGATCATTGCGGAATCTTCTGTATGGTTTGAATTTAAGTGCTAATGGGTTGGTGGGTGATGTTCCATTAGAGATTGGGAAACTGAACATGCTTCTGAGACTAGATTTATCTCTTAACAATCTGTCTGGGAGCATAAAAGTTCTTGAACAACTCTCTTCATTAGTTGAAGTCAATATCTCATTCAATTCATTTAATGGTCCTGTACCAAATTCACTGATGAAGCTGATGAGTTCTCATCCATCATCGTTCTTGGGCAATCCTGGTTTATGCGTTGATTGTTTGCCCTCAGATAGCTTGAATTGTCCAAAGGAGGTTAGTTTAAAGACTTGTGACTCCATGTCAAGTCATCATAAAGGTCAAAGCAAAAGCATGAGGAGAGAACTTGACACTGTTGGGAAGATTCGGCATCGAAATCTTGTCAGATTGAAGAACTTCTGGTTTGGAAAAGATTATGGCTTGATCATGTACACCTTCATGCAAAATGGAAGCTTGCATGATATTTTGCATGAAATGAATTCACCACCACCCTTGGATTGGAGTGTTCGCTATAAGATAGCTCTTGGAATTGCTCATGGACTGGCGTATCTTCATTTTGATTGTGATCCGGTCGTAGTACACAGAGACATCAAACCGCAGAATATACTATTAGATTCGGATATGGAGCCTCATATTGCTGATTTTGGCATTGCCAAGGTCTTGGATCAAATCACTGCTTCAACAACCTCTATAGCTGTCCCTGGCACTGTGGGGTATATTGCACCGGAAAATCATCTCGAGACTCGATAG 1209 0.397 MNLEFMDISNNNISGAIPSSLGNCKNLTDINLSMNKLSGFIPSELGKLENLRKLNLSDNNLQGPLPPLLSNCIKMEYFDVGFNNLNGSFPSSLRKWTGLATLVLRDNHFTGGIPTFLTEFEMLSELQLGGNAFGGGIPNLIGSLRNLLYGLNLSANGLVGDVPLEIGKLNMLLRLDLSLNNLSGSIKVLEQLSSLVEVNISFNSFNGPVPNSLMKLMSSHPSSFLGNPGLCVDCLPSDSLNCPKEVSLKTCDSMSSHHKGQSKSMRRELDTVGKIRHRNLVRLKNFWFGKDYGLIMYTFMQNGSLHDILHEMNSPPPLDWSVRYKIALGIAHGLAYLHFDCDPVVVHRDIKPQNILLDSDMEPHIADFGIAKVLDQITASTTSIAVPGTVGYIAPENHLETR 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0736 402 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 2 398 - -
Mibi01g0736 402 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 1 91 - -
Mibi01g0736 402 PRINTS Leucine-rich repeat signature 48 61 - -
Mibi01g0736 402 PRINTS Leucine-rich repeat signature 3 16 - -
Mibi01g0736 402 ProSiteProfiles Leucine-rich repeat profile. 50 72 IPR001611 GO:0005515
Mibi01g0736 402 Pfam Protein kinase domain 244 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0736 402 SUPERFAMILY L domain-like 2 231 - -
Mibi01g0736 402 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 92 186 - -
Mibi01g0736 402 Gene3D Ribonuclease Inhibitor 1 239 IPR032675 -
Mibi01g0736 402 FunFam Os07g0541700 protein 300 389 - -
Mibi01g0736 402 Gene3D Transferase(Phosphotransferase) domain 1 240 402 - -
Mibi01g0736 402 SUPERFAMILY Protein kinase-like (PK-like) 245 400 IPR011009 -
Mibi01g0736 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Mibi01g0736 402 Pfam Leucine rich repeat 2 61 IPR001611 GO:0005515
Mibi01g0736 402 SMART serkin_6 219 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0736 402 ProSiteProfiles Protein kinase domain profile. 148 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0736 Mibi-ChrMibi01 7031300 7033306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0736 256 401 Receptor kinase-like Gene Family AT1G73080 58.784 1.59e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g0736 Pkinase 3.3e-27 CL0016