Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0717 ATGTCGCATTCTGGGAAGCCCGATTCAGAACCAGGTTTACCCGCTCTCACCGAACGATTTCGCGATTCCCTTCGATGCGAGGCCAACAAACCAGATTTCCGAGAACTCGATCTCGGCTCACCGGTTTCCCCATTACGAACTCGTCAAAGTGGACCTGCAGTGAGTGGACTCACCACTACCACAAGCAGTAGTTCAAGTTCATCTGGATCAATTTCTGGACGCACAGGCCAAAATCCGGTCTCCAAAAGATCCGATTCAGGTGCCAACAACAATCATTCCGGTGAGCTTTCTGTTTCAAGCGAGAGCAGCCCTACAGCCGCCGAGAGCCTTCGATCTGGAGGGAACAATGCCAGGAGCTTTAAACCGGGTCACGCGAGATCCGATTCAGGAACAACACCGCCTCTAATCTACTCCGGTCAAACCTCCTCCGCCACGTCACCGGCGTTGAATGTTCTCCCCACCGGAAACATCTGTCCCTCCGGCAAGGTCCTCAAGACCGGCATGGCGGCAAATCGGACGTCCCGGACCGACGTTTTGGGCTCCGGTACGGCCAATTACGGCCACGGAAGCATAATGCGGGGCGGCGGAACATCGGCGGCGAGCACGGCGAATGCGAGGGCGACCGGTGGAGGCGGCGGTTTCAGGGAGCCGGTGAAGAAGGCGGCGGCGGCGGGGGTTTTGGATCCGGAGGAGGCGAAGAGGGCGGGGAATGAACAGTACAAGAGGGGTAATTTTACAGAGGCGTTGAGTTTTTATGATCTGGCGATTGGAGTGTCTCCTTGTAATGCCGCCTACCGGAGCAACCGTGCGGCGGCGTTGACGGCATTGGGACGGTTGAATGAGGCGGTGAGGGAATGTGAGGAGGCTGTGAGATTGGATTCCAATTATGGAAGAGCTCACCAGCGTCTTGCTTCTCTTTTTCTCCGGTTAGGACAGGTTGAGAATGCAAGGAAGCACCTATTTGGTCATGGGCTGCAGCAGGATCCTTCTGAGTTGCAGAAGCTGCAATCAGTGGAGAAGCATATAAACAAATGTACTGATTTTCGAAGGATAGGTGATTGGAAGAGTGCCCTCAGGGAAGTTGATGCTGCAGTTGCTGCTGGAGCAGACTCTTCACCTCAGCTCTTTATGTGTAGAGCAGAAGCCCTTCTAAAGCTCCACCAAATTGGTGATGCCGAATCAATTGTGTCAGCTATTCCTAAAACAGAATCACAATCTAAATCCTCATCCCAGGCAAGGTTTTTTGGGATGCTTTCTGAAGCTTATTCTTTCTTTGTTAGAGCTCAGATTGAGATGGCTTTGGGAAGGTTTGAAAATGCGGTTACAGCTGCTGAGAAAGCTGGCCTGATTGATCCTCGGAACATTGAAGTTTCTGTTTTGCTTAGTAATGTAAGGATGGTGGCCAGAGCTCGAGCCCGCGGAAATGATCTCTTCAAATCTGAAAGGTTCACCGAAGCTTGCTCTGCATATGAGGAAGGTTTAAGGCTGGACCCTTCAAATGCTGTTCTTTATTGCAACAGAGCTGCCTGTTTGTTTAAGCTTGGTAAATGGGAAAGATCAATTGAGGACTGCAATCGAGCTTTACACATCCAACCAAATTACACGAAAGCCCTCCTCCGAAGGGCTGCCTCAAATAGCAAGCTAGAAAGGTGGGAAGAAGCAGTCAAAGATTATGAGGTCTTACGAAGAGAACTTCCAGATGACAATGACGTTGCTGAAGCTCATTTCCATGCGTTTGTTGCATTAAAGAAATCTCGTGGGGAAGAAGTTTATAATTTGAAATTTGGTGGTGAAGTGGAAGCAGTATCTGGTCTTGAGCAGTTTAGGGCTGCCATTTCTTTATCAGGGGTTGACTGTAACCTTTACTCTGCAGGTGCATCTGTTGTCCATTTTGAAATTGAAACTGATTCGCAATGCAAACAATTATCGCCATTTGTGAATACACTATGCAGTCGATATCCTTCTGTTAACTTTCTCAAGGTGGATATTCAAAAAAGCCCTGCAATTGCAGCCGCGGAGAATGTTAGGTTGGTTCCAACTTTCAAGATCTACAAAAATGGCAGCCGTGTGAAGGAAATTGTTTGCCCCAGCCGAGATATGTTGGAACACTCTGTGAGGCATTACAGCACTTAG 2133 0.4937 MSHSGKPDSEPGLPALTERFRDSLRCEANKPDFRELDLGSPVSPLRTRQSGPAVSGLTTTTSSSSSSSGSISGRTGQNPVSKRSDSGANNNHSGELSVSSESSPTAAESLRSGGNNARSFKPGHARSDSGTTPPLIYSGQTSSATSPALNVLPTGNICPSGKVLKTGMAANRTSRTDVLGSGTANYGHGSIMRGGGTSAASTANARATGGGGGFREPVKKAAAAGVLDPEEAKRAGNEQYKRGNFTEALSFYDLAIGVSPCNAAYRSNRAAALTALGRLNEAVRECEEAVRLDSNYGRAHQRLASLFLRLGQVENARKHLFGHGLQQDPSELQKLQSVEKHINKCTDFRRIGDWKSALREVDAAVAAGADSSPQLFMCRAEALLKLHQIGDAESIVSAIPKTESQSKSSSQARFFGMLSEAYSFFVRAQIEMALGRFENAVTAAEKAGLIDPRNIEVSVLLSNVRMVARARARGNDLFKSERFTEACSAYEEGLRLDPSNAVLYCNRAACLFKLGKWERSIEDCNRALHIQPNYTKALLRRAASNSKLERWEEAVKDYEVLRRELPDDNDVAEAHFHAFVALKKSRGEEVYNLKFGGEVEAVSGLEQFRAAISLSGVDCNLYSAGASVVHFEIETDSQCKQLSPFVNTLCSRYPSVNFLKVDIQKSPAIAAAENVRLVPTFKIYKNGSRVKEIVCPSRDMLEHSVRHYST 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0717 710 SUPERFAMILY TPR-like 229 393 IPR011990 GO:0005515
Mibi01g0717 710 Pfam Thioredoxin 626 701 IPR013766 -
Mibi01g0717 710 SUPERFAMILY TPR-like 471 582 IPR011990 GO:0005515
Mibi01g0717 710 MobiDBLite consensus disorder prediction 20 34 - -
Mibi01g0717 710 Gene3D Tetratricopeptide repeat domain 228 587 IPR011990 GO:0005515
Mibi01g0717 710 Gene3D Glutaredoxin 601 709 - -
Mibi01g0717 710 MobiDBLite consensus disorder prediction 1 148 - -
Mibi01g0717 710 ProSiteProfiles TPR repeat profile. 501 534 IPR019734 GO:0005515
Mibi01g0717 710 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 707 IPR044534 -
Mibi01g0717 710 SUPERFAMILY TPR-like 368 465 IPR011990 GO:0005515
Mibi01g0717 710 FunFam TPR repeat-containing thioredoxin TTL4 593 709 - -
Mibi01g0717 710 MobiDBLite consensus disorder prediction 131 148 - -
Mibi01g0717 710 CDD TRX_family 606 702 - -
Mibi01g0717 710 SMART tpr_5 501 534 IPR019734 GO:0005515
Mibi01g0717 710 SMART tpr_5 421 454 IPR019734 GO:0005515
Mibi01g0717 710 SMART tpr_5 467 500 IPR019734 GO:0005515
Mibi01g0717 710 SMART tpr_5 297 331 IPR019734 GO:0005515
Mibi01g0717 710 SMART tpr_5 229 262 IPR019734 GO:0005515
Mibi01g0717 710 SMART tpr_5 535 568 IPR019734 GO:0005515
Mibi01g0717 710 SMART tpr_5 263 296 IPR019734 GO:0005515
Mibi01g0717 710 MobiDBLite consensus disorder prediction 43 116 - -
Mibi01g0717 710 Pfam Tetratricopeptide repeat 501 534 IPR001440 GO:0005515
Mibi01g0717 710 SUPERFAMILY Thioredoxin-like 614 705 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0717 Mibi-ChrMibi01 6864512 6867662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0717 243 565 Glycosyltransferase AT3G04240 22.018 5.36e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0717 01 6864512 6867662 Mibi07g1084 07 15050159 15053690 CCT
Mibi01g0717 01 6864512 6867662 Mibi01g0717 01 6864512 6867662 ECH