Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0713 ATGACTTGTAAACACGGAGACAAGCGGCTTTTGCTAGTCGCTTCTTATATACTTTTGCCAGTGCGGAAATTTGCTCTGAAGCATTTGAATTTACTAGTTAATGTTCGAACTGGATTGAATCCATTGGAGCCGCTGAGTTACTTTGTGATGAGTTGTTTCTCTTTTCTTGTCAAAAAAAAGGGATGTGTCTCAGCCACACAAACAGCCGAATTTGATCTTGAGGTTTCAGACATTAAGAATGTGAAACTTTACTCCTACAAGGAACTTCAAACTGCCACAGAAGGTTTTAGCCCAGCAAACAAGATAGGGCAAGGCGGTTTCGGATCGGTCTACAAGGGAAAGCTGAGAAATGGGACTCTTGCTGCTATAAAGGTGTTGTCAGCCGACTCGCATCAAGGGGTTCGGGAATTCCTGACAGAAATCAAGGTGATCACCAGCATAGAGCACGAGAACCTAGTTAAGTTGTTTGGATGCTGCGTAGAAGGAAATCACAGGATTTTAGTGTATGGATATCTTGAAAACAACAGCCTAGCTCAAACACTTATTGGTGGAGGCCATAGCAGTATTCAATTCAGTTGGCCGGTGCGGAGGAACATTTGCATAGGTGTTGCGCGGGGCCTAGCATTCCTTCATGAGGAGGTTGAACCACATATTATTCACAGAGACATTAAAGCAAGCAACATACTGCTTGATAAACACCTACAACCCAAAATTTCTGATTTTGGTCTAGCAAAGCTTCTTTCCCCAAACTTGACCCATATTAGCACACATGTTGCTGGAACTGCTGGCTATCTAGCGCCTGAGTATGCAATACGAAGTCAAGTAACAAGAAGATCAGATGTCTACAGTTTTGGAGTTCTCTTATTGGAAATTGTTAGTGGGAGGTGTAACACAAATAGACGGTTACCTCCCGAAGAACATTATCTTCTTCCCAAGGCATGGACTATGTATGAAAATGGGGAGCTGGAGAAACTGGTGGATGCATTGCTAGAAGACGATGTTAATGTTGAGGAGGCATGCCAGTTTTGTAAGATCGGTCTTCTATGCACTCAGGATTCTCCTCAGCTCCGACCATCAATGTCTGCTGTGCTTGGCATGTTGATGGGTGAAGTTGAAGTTGATGAAAAGAAAATTACAAAGCCAGGGTTACTATTTGAGTTTGTTGAAACCAAAGATAACAAGATGCATAAAGCTGAGGCTGAAGTGGAAAATATATCTTCCCTTGGCATCACAGGGAAGCAAGATAATTCCTCTTCGTTGGGAACCACGGCCTCTTTTGCTACCATGACCTTCTCTTCAATTTATGACCGAAGCTCTTAA 1320 0.4288 MTCKHGDKRLLLVASYILLPVRKFALKHLNLLVNVRTGLNPLEPLSYFVMSCFSFLVKKKGCVSATQTAEFDLEVSDIKNVKLYSYKELQTATEGFSPANKIGQGGFGSVYKGKLRNGTLAAIKVLSADSHQGVREFLTEIKVITSIEHENLVKLFGCCVEGNHRILVYGYLENNSLAQTLIGGGHSSIQFSWPVRRNICIGVARGLAFLHEEVEPHIIHRDIKASNILLDKHLQPKISDFGLAKLLSPNLTHISTHVAGTAGYLAPEYAIRSQVTRRSDVYSFGVLLLEIVSGRCNTNRRLPPEEHYLLPKAWTMYENGELEKLVDALLEDDVNVEEACQFCKIGLLCTQDSPQLRPSMSAVLGMLMGEVEVDEKKITKPGLLFEFVETKDNKMHKAEAEVENISSLGITGKQDNSSSLGTTASFATMTFSSIYDRSS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0713 439 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 58 401 - -
Mibi01g0713 439 SUPERFAMILY Protein kinase-like (PK-like) 77 367 IPR011009 -
Mibi01g0713 439 Gene3D Transferase(Phosphotransferase) domain 1 172 381 - -
Mibi01g0713 439 Pfam Protein kinase domain 99 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0713 439 ProSiteProfiles Protein kinase domain profile. 96 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0713 439 CDD STKc_IRAK 102 369 - -
Mibi01g0713 439 FunFam cold-responsive protein kinase 1 66 171 - -
Mibi01g0713 439 Coils Coil 388 408 - -
Mibi01g0713 439 FunFam Putative LRR receptor-like serine/threonine-protein kinase 172 379 - -
Mibi01g0713 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Mibi01g0713 439 Gene3D Phosphorylase Kinase; domain 1 66 171 - -
Mibi01g0713 439 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Mibi01g0713 439 SMART serkin_6 96 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0713 Mibi-ChrMibi01 6809588 6813753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0713 45 408 Receptor kinase-like Gene Family AT1G53420 46.154 3.82e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0713 Pkinase 9.3e-46 CL0016