Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0709 ATGATAAGCGGTGGATTATGCAGTTTCCGAATGTGTTGCTTGCATCTCCCTTGCTTCTCAGACAAATCTCTCCTCCGACCTGTTCGGTTATCTTTCACTTGCCGCCGCCGCCTTCTGGTCACTGCATCCTCGGTTTCCGGCGCCGATAAGAAGGAAGCTAAACAGAAGGTCATTGTTATTTCTGGCCCCACTGGGTCTGGTAAAAGCCGTCTTGCTTTAGAGCTCGCGAAGCGCCTCAATGGTGAAATTATTAGTGCAGATTCTGTCCAGGTATACCAGGCTCTTGATGTCGGATCAGCAAAGCCCTCAAAAAATGATAGAAAGGAGGTACCGCATCATCTGGTTGACATATTGCACCCATCTGAAGATTATTCTGTTGGGCATTTTTTTGAGGATGCAAGGCAAGCTACAAGATGCATTATTGACAATGGGCATGTTCCTATTGTTGTTGGGGGAACTGGATTGTACTTAAGATGGTTCATTTATGGAAAGCCTGATGTCCCCAAGGCCTCTCCAGAGACTTCATCTGAAGTGCATAAGGAGTTAGCTGAATTACAGAGAAATGAGCAATGGGATGCAGCTGTGCAGCTGGTTGTAGAGGCAGGGGACCCAAAGGCCCGATTCATAACTCCCAATGATTGGTATCGATTGCGACGCAGCCTTGAGATTATTAAGTCTAGTGGATCACCTCCATCTACTTTCCGAGTACCATATGATTCTTTCAGGGAACAGGGAGATTCTAGTGTTATGGACAACTCTGACTATTCTGATGTCAATGCTATTTCCAGTGGAATGAAAGAAACATCCTCAGATTTGGACTATGAGTTCATTTGCTTTTTCCTTTCCACATCAAGGCTTGACCTCTATAGATCAATTGATTATCGCTGTGAAGATATGCTATTAGAGAGGGATGGGATATTGTCTGAGGCTCAATGGCTTCTTAATATTGGTCTTCATCCTAATTCAAATTCTGCAACAAAAGCAATTGGCTACAGGCAGGCCATGGAATACTTAATAAAATGCAGACTGCAAGGGGGTCAGAGTTCAGTTCGAGAATTCTTCAATTTTTTATATGAATTTCAAAAGGCATCTAGGAATTTTGCCAAAAGACAATTGACATGGTTTCGAAATGAGCATATATACCACTGGCTTGATGCTTCTAAACCTCTGGACACCATTCTAGACTTTATCCATAGATCTTACCATAATAACAGTGGAGCTCTCATTGTTCCTGAACACTTGAGAATGCCTAGGGATGCTTCTAACGGTCGACAGGCTAATGAACTAAAGGTTTACCGCAGCAAAAATAGGATTTTCTTGAGTAAAGATGATTGCTCTCCTGTTCTGGACTGGATTAGGAGAACTCAAGCCTGA 1374 0.4316 MISGGLCSFRMCCLHLPCFSDKSLLRPVRLSFTCRRRLLVTASSVSGADKKEAKQKVIVISGPTGSGKSRLALELAKRLNGEIISADSVQVYQALDVGSAKPSKNDRKEVPHHLVDILHPSEDYSVGHFFEDARQATRCIIDNGHVPIVVGGTGLYLRWFIYGKPDVPKASPETSSEVHKELAELQRNEQWDAAVQLVVEAGDPKARFITPNDWYRLRRSLEIIKSSGSPPSTFRVPYDSFREQGDSSVMDNSDYSDVNAISSGMKETSSDLDYEFICFFLSTSRLDLYRSIDYRCEDMLLERDGILSEAQWLLNIGLHPNSNSATKAIGYRQAMEYLIKCRLQGGQSSVREFFNFLYEFQKASRNFAKRQLTWFRNEHIYHWLDASKPLDTILDFIHRSYHNNSGALIVPEHLRMPRDASNGRQANELKVYRSKNRIFLSKDDCSPVLDWIRRTQA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0709 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 186 IPR027417 -
Mibi01g0709 457 Hamap tRNA dimethylallyltransferase [miaA]. 57 395 IPR018022 GO:0008033
Mibi01g0709 457 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 54 387 IPR039657 -
Mibi01g0709 457 Pfam IPP transferase 90 378 - -
Mibi01g0709 457 FunFam tRNA dimethylallyltransferase 9 165 236 - -
Mibi01g0709 457 Gene3D - 54 436 IPR027417 -
Mibi01g0709 457 Gene3D - 166 236 - -
Mibi01g0709 457 TIGRFAM miaA: tRNA dimethylallyltransferase 57 234 IPR018022 GO:0008033
Mibi01g0709 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0709 Mibi-ChrMibi01 6744004 6751682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0709 60 357 C2H2 Transcription Factor Family AT2G27760 26.797 2.76e-20 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0709 01 6744004 6751682 Mibi01g0709 01 6744004 6751682 ECH