Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0697 ATGGTTCAGATTGATTTATTGCCTTATGTGATGATTTATTATCAGATGACTGCTTTGGAAATGGATCGACGAAGACAAGACTATTATCACTCTGAACCCTGTATTATTCTGAGGGGGCCCAACATCTCACAGCCAAATATTCACACGGTGGCGGCGGCTTCAGGAAACACTAGTAATGTTGATTCCCACTATTCGCCAGATGCTTATGACAATGGTTTGATGTATGGGATGACACAGTTTGATGGGATTCATCATCAACCCAATCTTGATGTGGGTGTTGCTGCATCATCTGGCTTGTTTTTTCCTCCCACGATTAACCCTGCCTCTGGTGCTGGAGTAGTACCTCAGCCCATTAATTACCAAGCATCTGATCAATTGCCGGCTCCATGCACATATGCTGTCTCTGGAATTTTCATGGATGATGCAAGATGTCCATACAAACAAAAAATGATTGAGGGCATGAGGGGAAATTACCCACATTTTAATGCTGCAGCTAGTTCTTCGGTAGCTCCTCTAAATGCAAGGCAGTCGGATGGGGTTACTGCATCATTTCCTTTGCCTCAATTCAGAGGAAATCACATTCCATCGCTTGTAGAAATGGGACCTCACGGTACTTTGTGGAGCAGATCTGACTCAGTTATGGTTCATGAACACAATCATATGATTCGAGGAAACTATTTGGGCCAGCATTTTCAAGCAGCTCCACCTCCCTGGTTTGACCACCAGTTGAACGGCACTAACAGTGAAGGACATAATATGGCCTGGAATCAGTCTCATTCAATGCCTTATATGCAAGCTGTTAACGGAAGTTCATTGGAGAATGCAAATACAGGTATGCAGGGATATCATGATACGGCTAGTAACAGAATCGACCTCAGGTTTGCTCATCCTCCTCCTGTTAGCCACCAGCACCATAATTATCACTTTCCAACTCTGCCTATGCAAGGAGTAAGAGGCCACAGTATCAACTTTCACCCTCCAGTTACTGCAACAACTTATAGAGGGGTTCCATCAAATTCTCCACCCAATACCATTGTCCCGGTGCAGAATGGTTTAAGGTTGGGTGCTAGGCATGTTAGCCCCACACCATCAGCAAGCCAAAGGATGCATCGTTCTCGTAGAGGAGTCATGCCCAATACGTCTCTTAGACATCACAGTTCCCGTCCAGCGAGTTTTCTCCATGTTGATGATGTTGCTTTACTAGATGAAGTGGAAAATTTAGTTGACCGTCGTCATGGTGATATGCGTTTGGACATAGAGGATATGTCTTATGAGGAGCTTCTTGCTCTGGGCGAGCGGATTGGCAATGTGAACACAGGTTTGTCAGAGGAAACTATCACTACTCAATTGAAAACAAAAACTTTTGAGCCCTCAGCCACAGCTAATCTGGAGGAGGCAGCATCTGAGGATGAGGAAACTGATTCTTGCATCATATGCCTGGACGAATATAAGAACCAACAGACGGTTGGAATGCTCCAATGTGGCCACGAGTATCATGCTGATTGCTTGAAGAAATGGCTGCTGCTAAAGAACGTGTGCCCTATATGCAAATCAGAGGCATTGACCCCTAGAAGGAAGGACGTATAA 1587 0.4486 MVQIDLLPYVMIYYQMTALEMDRRRQDYYHSEPCIILRGPNISQPNIHTVAAASGNTSNVDSHYSPDAYDNGLMYGMTQFDGIHHQPNLDVGVAASSGLFFPPTINPASGAGVVPQPINYQASDQLPAPCTYAVSGIFMDDARCPYKQKMIEGMRGNYPHFNAAASSSVAPLNARQSDGVTASFPLPQFRGNHIPSLVEMGPHGTLWSRSDSVMVHEHNHMIRGNYLGQHFQAAPPPWFDHQLNGTNSEGHNMAWNQSHSMPYMQAVNGSSLENANTGMQGYHDTASNRIDLRFAHPPPVSHQHHNYHFPTLPMQGVRGHSINFHPPVTATTYRGVPSNSPPNTIVPVQNGLRLGARHVSPTPSASQRMHRSRRGVMPNTSLRHHSSRPASFLHVDDVALLDEVENLVDRRHGDMRLDIEDMSYEELLALGERIGNVNTGLSEETITTQLKTKTFEPSATANLEEAASEDEETDSCIICLDEYKNQQTVGMLQCGHEYHADCLKKWLLLKNVCPICKSEALTPRRKDV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0697 528 Pfam Ring finger domain 474 517 IPR001841 -
Mibi01g0697 528 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 437 521 IPR013083 -
Mibi01g0697 528 MobiDBLite consensus disorder prediction 359 388 - -
Mibi01g0697 528 ProSiteProfiles Zinc finger RING-type profile. 476 517 IPR001841 -
Mibi01g0697 528 SUPERFAMILY RING/U-box 471 523 - -
Mibi01g0697 528 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 145 521 IPR045191 GO:0061630
Mibi01g0697 528 FunFam E3 ubiquitin ligase BIG BROTHER 437 521 - -
Mibi01g0697 528 SMART ring_2 476 516 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0697 Mibi-ChrMibi01 6630365 6633269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0697 385 521 C3H Transcription Factor Family AT2G15530 45.390 8.85e-35 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0697 01 6630365 6633269 Mibi01g0697 01 6630365 6633269 ECH