Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0686 ATGCGATTATCGTCCGCTTCCGGTTCGTCATTGGACCAGAGGAGACTTGATCGATCGGGGTTGCGGCTTCGGAAGAAGCACAAGAGGCTAGACGCAATATGCGAGAATGAATTTAAACGGAACCATAGTGAATTGAATGAGGATGATGATGATGGTGATGGGGCTGGCACTTCAGGCGCCGATACAGAGCTCCGCCGCAGCTCCAGGGTTCGGCGAGCTCCGGTTTTGCTTGATGCCTCTCCTCCTCCACCTAAGAGACGGCGGAAGTTAGGTAAGAATGTAATGCTGAGGAGTGTGAGTGATGCTGAGAGCCCAGCACATGTGAATCAGAGTCCTGGTGGAGTGGAGCATCCTCATACATGGAGTGCAAGGTTGAGATCCCGGGGTAGAAATGTAGGTTTTACAGTGAAGGGGGAGAGGGAATCACCCAGAGGTAAAAGGAAGCTCTTTGAGGGTATGGATGAAAGCAGGGACGTTGGAAAACCAGAGGTTAACAAGAAAGAGGAATTAGAAGGTGGGATGCCGAAGGTTGTTAAGTCAAAGAGACCAGGGAGGATCAAAGCAACAAAACATGCGGAAGAGCATAAACATAATGAGTCGCACGGGAACTTAGATGAGACCAAGAGTCAAGAAGTGGTGCTTACGTTGGATGAGGATGGGGAGGGTGCTTCAATTTCAGGATCTAAATTGTCTGAGGAGAATGTAGTGGAAATAGTGGATGGGAATGCCTCTCCAAACATAGAGACCAGCGAGAGAAACATATGTGATAACTTGCAGTCACAGGAGTTTAATGGTAATGTTGAATTGTCCCCGGTGGAACATGTAGATAAATCAGTTGATCAATTGGAGGGTGTGGAGGAAGGTGAAACTGGAAGAGATGCTGTAGAAAGTTTTGAGAATCTGGCCAAGCCAGTAGAAAATGCAGGATCTATCCACAAGGAATCTACAGTCGAAAAGACCTTGCAGGATGAAAATATTGTAAAAACAGACAAGCCTAAACAAGCTTCAAATGATAAAACTGACCAACCCCGGATTAAAGAAGGCAGAAGGTGCGGTTTGTGTGGTGGAGGGACTGATGGTAAACCTCCAAAAAGGTTACTTCTGGATAATGGTGATAGTGAGAATGAGGCATATAGTGGGTCTTCAGCATCTGAGGAGCCTAATTATGATCCTTGGGATGGTTTTGGTGACGAATCTGGCTGGCTTGGCCGTCTCTTAGGTCCTATTAACGATCGCAATGGTATTGCCAGAATATGGGTTCATCAGCACTGTGCTGTATGGAGTCCAGAGGTATATTTTGCTGGCTTGGGATGTTTAAAAAATGTGAGGGCTGCTCTTTGCAGAGGAAGGGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCATTGGTTGTCGGGTTGATCGGTGTCCAAAGACGTATCACTTGCCGTGTGCAAGAGCAAATGGTTGTATCTTTGATCATCGCAAATTTCTTATAGCCTGTACAGATCATAGACATCTCTTCCAACCGCAAGGTAATCAATATATGGCACGGATAAAAAAACTGAAAGCTCGGAAGATTAAGTTGGAGATGAGAAAGATTTCAAATGATGCTCTGAGAAAGGATATTGAAGCAGAAGAAAAATGGTTGGAGAACTGTGGTGAGGATGAAGAATTTTTGAAACGTGAGAACAGGAGGCTTCATCGTGATTTGTTGAGAATTGCCCCTGTATATATTGGTGGCCCTGACTCTGATGGTGAAAGATCATTTCAGGGTTGGGAATCTGTTGCTGGGCTTAAGGATGTCATCAGTTGCATGAAAGAAGTTGTTATTTTGCCTCTGCTTTATCCTGAGTTCTTTGATAATTTAGGTCTTACACCTCCAAGAGGTGTTCTGTTGCATGGATATCCTGGAACAGGCAAAACTTTAGTAGTTAGAGCATTGATAGGCGCATGTGCTCGCGGTGATAAACGGATTGCATATTTTGCTCGCAAAGGTGCGGATTGCTTGGGGAAATATGTGGGTGATGCTGAGCGCCAACTGAGACTACTATTCCAGGTTGCAGAAAAATGTCAACCTTCTATAATATTCTTTGACGAGATAGATGGATTAGCCCCAAGCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACACTGCTAGCTCTTATGGATGGTTTGAAATCTAGGGGTTCAGTTGTAGTCATAGGTGCAACAAATCGTCCTGATGCTGTTGACCCAGCACTTAGACGTCCGGGAAGATTTGATCGGGAAATTTATTTTCCATTGCCATCAACTGAGGACAGAGCTTCCATTCTCTCACTTCACACGCAGAGGTGGCCAAAACCGATCACTGGATCCTTACTTGAGTGGATTGCAAAAAACACTCCTGGATTTGCTGGTGCAGATCTCCAGGCTCTTTGTACCCAAGCTGCCATCAACGCTTTGAAGAGAAACTTTCCTTTGCAAGAAGTGCTGTCTGCAGCTTCGGAGGAAGATTCTGGCGGCAAGCGCCTTCCACTTCCATCCTTTGCAGTGGAGGAAAGGGACTGGTTGGAGGCTTTATCATGTGCACCACCACCATGCTCCCGGAGAGAAGCTGGTACTGCTGCAAATGACATAGTATGCGCCCCTCTTCCCACCCACCTTATACCTTGTTTGTTGCAACCATTATGCACTCTGCTTGTATCTTTGTATCTTGATGGACGCCCATGGTTGCCACCTACTATGTTTAAAGCTGTAACAAGGATTAAAAGTGCTATGGTTTCTTCTCTGGACAAAAAGAAAATGTCTATTGATCGGTGGTGGTTGCACGTTGATGATTTTCTTCAAGACACAGATTTTGCTGCCAATTTAGGGAGGAAACTCACTTGTGCTGGCATTATATCTGCAAATGATGGCCCTGCTGGTTCTTGTGATCCTGTAGATGATACTGATGTTGATGTAAAACTTGAACCTTCTATAAAGCACCGTGTCCGCACATGTACTGGTTTATTGTCAAATATGTCATTTACAGTGTTGAAGGAATCAGGATTTCGAATATTGATTACTGGAAATCCCAAAACTGGTCAGAGGCATCTTGCTTCCTGCCTTCTCTACTGCTTTGTTGGTAATGTTGAGATACAGAAGATTGATATGGCAACTATTTCACAAGAAGGACATGGAGATGTGGTGCAAGGGATTTCACAAATATTAATGAAATGTGCTGGTGTGCAATCGTGTGTAGTCTTCATGCCAAGAATTGATCTGTGGGCTCTGGAGACTCATTTTCAGGTTGCTGAAAGTTCTGATGACTGCTCCATTAATAATCAACTTTCTGAGATGGAAGAGTCTTGTTTAACACTGAGTGAGGTCGTTGAAAAGAAAAGTGAATTCAATGCAAAGAAATGGAAATCTGTAGATATGGCCAAAGGTCAAGTCATCTTACGGGCTTCACATGCATGGATGTCATTTATTGAGCAGGTGGACTCCATTGGTGCATCTACATCCTTGATGATTCTGGCTACTTCAGATGTTCCATATTCAGAACTTCCATGTAACGTAAGGGAGTTTTTTAGGAGTTACCAATCAAGCTGCAGCCAGCCTGCTTCATTGTTTCAGACAGTGCCTCGTTTTTCTGTGCAAATTGAGGGGAACTTTAATCATGAGGTCATGATCAATCTATCCACGGTGGAGCTAATGAGGAATGTAATTGAGCAGCTGATTCAATTGGTCCACAAAAAATCTCATATGCATGTGGTAGCCCGCAAAGGGAACATAACATATGATTCAGTTCAAGGTTGTCAGGATAGGGCATATATGGGAAAAGATTATGGATCAGTCACTGGTGATAAGCTTAAAGTCCAACTTCCTGAACCCTCTACTAATGTTTCATCACCAACTAGCATTAGACCAATGAAGCAAAAGTCAACCCTGTTGTTGGCAATATCAACCTTTGGGTATCAGATTATTCGTTTTCCTCATTTTGCAGAACTTTGTTGGGTCACATCAAAGCTTAAAGAAGGTCCTTCAGCTGATGTAAGTGGACCTTGGAAGGGTTGGCCTTTCAATTCCTGCATAATTCGTCCTAGTACCCTGCAAGACAAGTTGGCTAATTCTTGCAGCTCTAGCAATATTAAAAACAAAGAAAAATCTGGTATTGTCAGAGGCCTCTTGGCTGTTGGCTTATCAGCATACAGAGGTGCCTATACATCTGTTAGGGAAGTTTCTAGTGAGCTGCGCAAGGTTCTTGAGATATTAGTTGAGAAAATCAATACAAAAGTTCAAGCCGGGAAAGATAGATTTCAGTTTCTTCGTATTCTATCACAAGTGGCTTATTTGGAGGATATGGTCAATAATTGGGCCTATGCATTGACGAGTCTTGAGCAAGACTCCCCAGAGGTGGCAGCAAAACTTGCATCGACTACTGTTGGATCATTAAATGGACCTGAAAACCAACTAGTTGAAGATGAGGGTTGCCAGTTGGTTGCCCCTGTGGAAGGTCATGAACCAGAGAAGCTGGAGGAAAGTCCCAATGCAATTGCTGCCAAGACACTAGAATCTCATGCTTTGAATAACAGAAATGATAATGTGGATAATGCTGAGCATGATGACAAAGTTTCAGGAGAAACTCCACAGAATAGTTCTTTTTCAGATGATCATATTAACAACTCTGCTGCCATGAGCCAGCCCGTTGATCCAGTTACAATTGTGGAAAATGGCACACTATCTAAAGTATCTGAATCAGGAACAATGAGAAATCCTGAAACAATCGATGGAGAAATTGGGCCCTTAAAAGGCTCAAATGGATCTTCACTCACTCACACTGTTTCACTTTCCGGAAATGAAGAGTTCATAGTGTCAAATGGCTTAAATGGATCAACATCTACCCATCCTGCTGCCCTTTCTGATAATGAACTTCACAATGCCTGCCAACCAGAGGGTGTTGAGATTGAAGACTCCAGGACAGCCTCTGTTACTGTTCCCAGCTTTTCATCGGCAGGGACTGGTATTAAATTAAGCGGTGGTGACTCTGGTGTAGCTACAAATGCTGTGGAAATTAGTGACTCTCCAAGCAAAAGCAGTGATCCTGCTGAATCTGGGGTTGTCTGTTTGTATCGATGTTGCCCTCAATGCCTTGACAGTCTTTATCATTTGACACGCAAAATTCTTGTTCATAAGTGTAGCTTGATTGGAAGCGATTTGGTTGTAGAAGATGTCCATGATGTTCTTGCATCATTATCTGTGGATCTTATTACAGAGGTTAAAAAACTTTATTCTGCTGAAGATTCTAATGACTTGTCAGATAAAATCTTTGGCCATGCAAAGTCTGAAGTGCATCCTGACTGTTCAAACTCGAGAATTTGTAACGCCGGAAACCAAGACAGGGTTTTTGTGGCAGCTGAATGTGTGTCTCACTCTACAAGCCGACATACAGCTGGAAGCAGAGATACGGCATTGAATGAATCGAAGCTTGATTTAAAATGTGTTTTCAGAGATGGTGTACTGGTTCAAATGGACCCTGATAAAGAAGTCTCCCTTCACTGTAAATTTGAGACCTTGTGCCTCTGTTCTTTTATAGAGTTGATAGTAATGACGAAGCACCCGTTTGGCTGA 5589 0.4359 MRLSSASGSSLDQRRLDRSGLRLRKKHKRLDAICENEFKRNHSELNEDDDDGDGAGTSGADTELRRSSRVRRAPVLLDASPPPPKRRRKLGKNVMLRSVSDAESPAHVNQSPGGVEHPHTWSARLRSRGRNVGFTVKGERESPRGKRKLFEGMDESRDVGKPEVNKKEELEGGMPKVVKSKRPGRIKATKHAEEHKHNESHGNLDETKSQEVVLTLDEDGEGASISGSKLSEENVVEIVDGNASPNIETSERNICDNLQSQEFNGNVELSPVEHVDKSVDQLEGVEEGETGRDAVESFENLAKPVENAGSIHKESTVEKTLQDENIVKTDKPKQASNDKTDQPRIKEGRRCGLCGGGTDGKPPKRLLLDNGDSENEAYSGSSASEEPNYDPWDGFGDESGWLGRLLGPINDRNGIARIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHLFQPQGNQYMARIKKLKARKIKLEMRKISNDALRKDIEAEEKWLENCGEDEEFLKRENRRLHRDLLRIAPVYIGGPDSDGERSFQGWESVAGLKDVISCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQRWPKPITGSLLEWIAKNTPGFAGADLQALCTQAAINALKRNFPLQEVLSAASEEDSGGKRLPLPSFAVEERDWLEALSCAPPPCSRREAGTAANDIVCAPLPTHLIPCLLQPLCTLLVSLYLDGRPWLPPTMFKAVTRIKSAMVSSLDKKKMSIDRWWLHVDDFLQDTDFAANLGRKLTCAGIISANDGPAGSCDPVDDTDVDVKLEPSIKHRVRTCTGLLSNMSFTVLKESGFRILITGNPKTGQRHLASCLLYCFVGNVEIQKIDMATISQEGHGDVVQGISQILMKCAGVQSCVVFMPRIDLWALETHFQVAESSDDCSINNQLSEMEESCLTLSEVVEKKSEFNAKKWKSVDMAKGQVILRASHAWMSFIEQVDSIGASTSLMILATSDVPYSELPCNVREFFRSYQSSCSQPASLFQTVPRFSVQIEGNFNHEVMINLSTVELMRNVIEQLIQLVHKKSHMHVVARKGNITYDSVQGCQDRAYMGKDYGSVTGDKLKVQLPEPSTNVSSPTSIRPMKQKSTLLLAISTFGYQIIRFPHFAELCWVTSKLKEGPSADVSGPWKGWPFNSCIIRPSTLQDKLANSCSSSNIKNKEKSGIVRGLLAVGLSAYRGAYTSVREVSSELRKVLEILVEKINTKVQAGKDRFQFLRILSQVAYLEDMVNNWAYALTSLEQDSPEVAAKLASTTVGSLNGPENQLVEDEGCQLVAPVEGHEPEKLEESPNAIAAKTLESHALNNRNDNVDNAEHDDKVSGETPQNSSFSDDHINNSAAMSQPVDPVTIVENGTLSKVSESGTMRNPETIDGEIGPLKGSNGSSLTHTVSLSGNEEFIVSNGLNGSTSTHPAALSDNELHNACQPEGVEIEDSRTASVTVPSFSSAGTGIKLSGGDSGVATNAVEISDSPSKSSDPAESGVVCLYRCCPQCLDSLYHLTRKILVHKCSLIGSDLVVEDVHDVLASLSVDLITEVKKLYSAEDSNDLSDKIFGHAKSEVHPDCSNSRICNAGNQDRVFVAAECVSHSTSRHTAGSRDTALNESKLDLKCVFRDGVLVQMDPDKEVSLHCKFETLCLCSFIELIVMTKHPFG 1862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0686 1862 CDD AAA 620 761 - -
Mibi01g0686 1862 Gene3D - 762 854 - -
Mibi01g0686 1862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 854 IPR027417 -
Mibi01g0686 1862 MobiDBLite consensus disorder prediction 28 47 - -
Mibi01g0686 1862 ProSiteProfiles Extended PHD (ePHD) domain profile. 390 500 IPR034732 -
Mibi01g0686 1862 MobiDBLite consensus disorder prediction 1 165 - -
Mibi01g0686 1862 MobiDBLite consensus disorder prediction 133 165 - -
Mibi01g0686 1862 Pfam PHD-like zinc-binding domain 421 500 - -
Mibi01g0686 1862 Pfam ATPase family associated with various cellular activities (AAA) 626 761 IPR003959 GO:0005524|GO:0016887
Mibi01g0686 1862 MobiDBLite consensus disorder prediction 1534 1578 - -
Mibi01g0686 1862 ProSitePatterns AAA-protein family signature. 731 749 IPR003960 GO:0005524|GO:0016887
Mibi01g0686 1862 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 762 854 - -
Mibi01g0686 1862 FunFam ATPase family, AAA domain-containing 2 585 768 - -
Mibi01g0686 1862 PANTHER AAA DOMAIN-CONTAINING 25 1759 IPR045199 -
Mibi01g0686 1862 MobiDBLite consensus disorder prediction 306 390 - -
Mibi01g0686 1862 MobiDBLite consensus disorder prediction 312 348 - -
Mibi01g0686 1862 Gene3D - 588 862 IPR027417 -
Mibi01g0686 1862 Pfam AAA+ lid domain 787 819 IPR041569 -
Mibi01g0686 1862 MobiDBLite consensus disorder prediction 1515 1600 - -
Mibi01g0686 1862 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 502 IPR013083 -
Mibi01g0686 1862 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 346 502 - -
Mibi01g0686 1862 SMART AAA_5 622 763 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0686 Mibi-ChrMibi01 6548889 6557050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0686 588 823 Calmodulin-binding Proteins AT3G56690 40.756 2.57e-45 177