Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0683 ATGGAGAATTTCTTCTTGTCGTTCCAAAACCAGAAACACAATAAAAAGAGGCTGAATGAAAAACAAGTGGCCATCCTAGAGGAAAGCTTTGCAAGCAGTAAGAAGCTGGAGCCAGAGCAGAAGTTGCAGCTCTCAGAACAACTTGGTGTGCCTCCAAGACAAATTGCAATATGGTACCAGAATAAACGAGCTCGCTGGAAGACACAGAGTCTTGAGGAGGACTATAGTGCCTTGCAGTTGAAGCTAGAGAGTGTGATGACAGAGAAGAAGCAGCTTGAGAGAGATGTTGAAAGGCTCAAGGCAGAGCTGAAGGAGGCTAGAGATATGTTGCTCTTCATGAAACGTGAAGGAGAATCTCATAATCATAGTTGTGTGGCTGAATTTTCACATGATTGTTTTGAAGAGCTTTATACTTGTTTCATGGGCCAAAATAAATTCGTCTAA 444 0.4234 MENFFLSFQNQKHNKKRLNEKQVAILEESFASSKKLEPEQKLQLSEQLGVPPRQIAIWYQNKRARWKTQSLEEDYSALQLKLESVMTEKKQLERDVERLKAELKEARDMLLFMKREGESHNHSCVAEFSHDCFEELYTCFMGQNKFV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0683 147 Coils Coil 68 116 - -
Mibi01g0683 147 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 11 121 IPR045224 GO:0003700
Mibi01g0683 147 ProSiteProfiles 'Homeobox' domain profile. 9 69 IPR001356 GO:0003677
Mibi01g0683 147 Gene3D - 8 76 - -
Mibi01g0683 147 SMART HOX_1 11 73 IPR001356 GO:0003677
Mibi01g0683 147 CDD homeodomain 12 70 IPR001356 GO:0003677
Mibi01g0683 147 Pfam Homeodomain 14 67 IPR001356 GO:0003677
Mibi01g0683 147 ProSitePatterns 'Homeobox' domain signature. 44 67 IPR017970 GO:0000981|GO:0006355
Mibi01g0683 147 SUPERFAMILY Homeodomain-like 11 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0683 Mibi-ChrMibi01 6533817 6534260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0683 12 142 Homeobox Transcription Factor Family AT5G53980 45.985 1.61e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mibi01g0683 Homeodomain 1.7e-15 CL0123