Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0679 ATGGATAGCTACTTCCATGTTGATAATGGTGATACTCATCTCCCTCCTGGGTTTCGCTTCCACCCAACTGATGAGGAACTCATTACCTGTTACCTCCTGAAGAAGGTTCTTGACAGTACCTTCACTGGTAGAGCCATTGCTGAAGTTGATCTCAACAAGTGTGAGCCATGGGAGCTTCCTGAGAAAGCGAAGATGGGTGAGAAAGAGTGGTACTTTTTCAGCCTCCGAGACAGGAAATACCCAACTGGTCTACGAACTAATAGGGCTACAGAGGCTGGATACTGGAAGGCCACTGGGAAAGACAGAGAGATTTACAGCTCAAAAACATGCTCTCTGGTGGGAATGAAGAAGACTCTTGTTTTCTACAGAGGCAGAGCTCCTAAAGGCGAGAAGAGCAACTGGGTCATGCATGAGTATCGTCTTGAAGGCAAATTTGCCTATCACTACCTTCCACGCAGCTCCAAGGATGAATGGGTCATCTCGCGTGTTTTCCAGAAGAGCCTCACCTCCGGTGTGAACGGCGGCTCCGGCGTGTCCTCCGCCGCCGCCGGCCCCAAGAAGAACAACGCAAGAGTGATGAACAGTTCTGTTAGCATGAGCCTTTACCAAGAACCAAGTTCTCCTTCTTCCATCTACCTCCCCCCTCTGCTTGATTCATCGCCGTACGCCGCCGCCGCCGCCAACGACCGTGACAGCTGTTCCTACGACTGCAGTAGTACAACTCCCAGGGAGCACGTGTCCTGTTTCTCCACATTCTCTGCCGCCTCCGCCGCCAACAACAACCTCCCCAATGTTAGCTATGAACTCAACCTTCCTCCGCCGCCGCCGGCGGCTATGGACCCATTTGCTCGGTTCCAGAATAGTGTTGGTGTTCCTGTGTTTCCTAGCCTGAGGTCACTTCAGGAGAATCTTCAGCTTCCTTTTCTGGCTCCGGCCACCGCTCACGGTGGTGACATGACCGGATGGGTGAAGCCGGAGGAGCAGGCTGTGGTGGGCGGTGGCATGACGCTTTGTACGTCGGAGCTTGATTACATGTGGGGTGGTGGCTACTAG 1053 0.5328 MDSYFHVDNGDTHLPPGFRFHPTDEELITCYLLKKVLDSTFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLPRSSKDEWVISRVFQKSLTSGVNGGSGVSSAAAGPKKNNARVMNSSVSMSLYQEPSSPSSIYLPPLLDSSPYAAAAANDRDSCSYDCSSTTPREHVSCFSTFSAASAANNNLPNVSYELNLPPPPPAAMDPFARFQNSVGVPVFPSLRSLQENLQLPFLAPATAHGGDMTGWVKPEEQAVVGGGMTLCTSELDYMWGGGY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0679 350 FunFam NAC domain-containing protein 100-like 23 170 - -
Mibi01g0679 350 ProSiteProfiles NAC domain profile. 14 166 IPR003441 GO:0003677|GO:0006355
Mibi01g0679 350 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Mibi01g0679 350 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Mibi01g0679 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 234 - -
Mibi01g0679 350 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0679 Mibi-ChrMibi01 6505698 6507442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0679 4 310 NAC Transcription Factor Family AT5G53950 60.429 3.22e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g0679 NAM 2.1e-40 No_clan