Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0676 ATGGCTCCCAAAGACTCAACCGCTGACCCCACCGCCCTCCCCTCCAAGGAGATTCGCTTTCGCGGCGTACGCAAACGCCCCTGGGGCCGCTACGCCGCCGAGATCCGCGACCCCGCCAAGAAAACCCGCGTCTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCGCGTGCCTACGACGCCGCCGCACGTGACTTCCGTGGCCCCAAGGCCAAGACCAATTTCCCCTCTCCTTCCGACCTCCTCATCAACACCTCCTTACGCAGCCCCAGCCAGAGCAGCACCTTCGATTCTTCCTCTCCTCCTCCCCCGCCGCTTGACCTCACCCTCGCCGCCGGCGTCGGTGCCTTGGCTTTCCCCTTGGCCCGTCCCCTCGTGTTCTTCGATGCTTTTGCCAGGCCTGACAACATGAGACTCGTCGCCGGCCGCCGTGAGATCTGCAGGTTTGACCTGCCGGTCGCAGATTTGCGCGCCGTCGCCGGTGGCGTTCAGAGTGACTCTGACTCTTCGTATGTGGTGGACTACGAGCGTGGTCCCCAGCCACGTAGGCTTCTGGATCTCGACCTCAACCTCGCTCCTCCCGCGGAGGTTGCCTGA 597 0.6516 MAPKDSTADPTALPSKEIRFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAARDFRGPKAKTNFPSPSDLLINTSLRSPSQSSTFDSSSPPPPPLDLTLAAGVGALAFPLARPLVFFDAFARPDNMRLVAGRREICRFDLPVADLRAVAGGVQSDSDSSYVVDYERGPQPRRLLDLDLNLAPPAEVA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0676 198 MobiDBLite consensus disorder prediction 68 104 - -
Mibi01g0676 198 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Mibi01g0676 198 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mibi01g0676 198 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mibi01g0676 198 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Mibi01g0676 198 FunFam Ethylene-responsive transcription factor 2 19 77 - -
Mibi01g0676 198 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 135 - -
Mibi01g0676 198 CDD AP2 19 76 IPR001471 GO:0003700|GO:0006355
Mibi01g0676 198 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
Mibi01g0676 198 MobiDBLite consensus disorder prediction 77 96 - -
Mibi01g0676 198 SUPERFAMILY DNA-binding domain 20 76 IPR016177 GO:0003677
Mibi01g0676 198 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0676 Mibi-ChrMibi01 6486635 6487231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0676 1 129 AP2-EREBP Transcription Factor Family AT3G15210 59.184 6.18e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g0676 AP2 2.4e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0676 01 6486635 6487231 Mibi06g1024 06 29973074 29974295 ECH
Mibi01g0676 01 6486635 6487231 Mibi01g0676 01 6486635 6487231 ECH