Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0669 ATGGAGGCTAGAAGCATAGAGAGGAAACGACTATTCACTGAGAAGTCAAAGGATAAAATCATTGAAGAAGCAGAAGATGAAGAAGAGGAAGAAGAAGAAAGGAAGGGTGGTAATGGCAGTCATGTTGCAGAAGAAGAAAAGAAGAAAGGAATTGGTGGGAGTAACAGAAGAGGATCAAGTGGTGTTTATAAAGTTTCTTCAGCTTCCTGTCAAGCAGAGAGGTGTGGAGCTAACTTGGCTGATGCAAGGAGATACCATCGCCGCCATAAAGTGTGTGAGTTTCATTCCAAGGCGCCTATTGTGATCGTTTCAGGGATGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACATAGGTGAATTTGATGAGGCGAAGAGGAGCTGCCGGAAGAGATTGGCAGAGCACAATGAGAGGAGGCGGAAAAGTAATACTGAAACTCACAATGATGGCGGCGAAGATCATCATCATCATCAGAACCAAATGGAAGGCCGATTCAGGCATGTCGATGACAGGGGAAGAAGAGTGGATCAGATGAACGTTAATACTGGGAATTGGAGCAGCAAGTCTCTCAATATCAGATAA 588 0.449 MEARSIERKRLFTEKSKDKIIEEAEDEEEEEEERKGGNGSHVAEEEKKKGIGGSNRRGSSGVYKVSSASCQAERCGANLADARRYHRRHKVCEFHSKAPIVIVSGMRQRFCQQCSRFHDIGEFDEAKRSCRKRLAEHNERRRKSNTETHNDGGEDHHHHQNQMEGRFRHVDDRGRRVDQMNVNTGNWSSKSLNIR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0669 195 Coils Coil 14 34 - -
Mibi01g0669 195 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 33 146 IPR044817 GO:0003677
Mibi01g0669 195 MobiDBLite consensus disorder prediction 1 62 - -
Mibi01g0669 195 MobiDBLite consensus disorder prediction 134 195 - -
Mibi01g0669 195 MobiDBLite consensus disorder prediction 134 178 - -
Mibi01g0669 195 SUPERFAMILY SBT domain 69 148 IPR036893 GO:0003677|GO:0005634
Mibi01g0669 195 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g0669 195 MobiDBLite consensus disorder prediction 179 195 - -
Mibi01g0669 195 MobiDBLite consensus disorder prediction 34 53 - -
Mibi01g0669 195 Pfam SBP domain 70 143 IPR004333 GO:0003677
Mibi01g0669 195 ProSiteProfiles Zinc finger SBP-type profile. 67 144 IPR004333 GO:0003677
Mibi01g0669 195 Gene3D - 61 131 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0669 Mibi-ChrMibi01 6418145 6418851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0669 43 147 SBP-box Gene Family AT2G33810 60.952 2.86e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi01g0669 SBP 2.9e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0669 01 6418145 6418851 Mibi06g1013 06 29864712 29866680 ECH
Mibi01g0669 01 6418145 6418851 Mibi01g0669 01 6418145 6418851 ECH