Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0630 ATGGGAGTTCCAGAGACAGACCCTCTAGCTCAATTGAGTCTTCCTCCTGGCTTTCGCTTTTTCCCCACCGACGAGGAGCTTCTTGTTCAGTATCTCTGCCGGAAAGTGGCCGGCCACCATTTCTCTCTGCAAGTCATTGGCGATATTGACTTGTACAAATTCGACCCATGGGTCCTCCCAAGCAAAGCCATCTTTGGTGAGAAAGAATGGTACTTTTTTAGCCCCAGAGACAGGAAGTACCCGAATGGATCCAGACCCAACCGGGTCGCCGGGTCAGGTTACTGGAAAGCCACCGGAACCGACAAAATCATCACCACCGCCGGCAGAAAAGTGGGCATAAAGAAAGCTCTCGTCTTTTATATTGGGAAAGCACCAAAAGGCACCAAAACCAATTGGATCATGCACGAGTACCGCCTCCTAGATTCCTCCCGAAAGATCGGAAGCACCAAGCTCGATGATTGGGTTCTGTGTCGGATATACAAGAAGAACTCGGGATCCCAGAAGCCTATGCCCATGATGGTTCCCAACAAAGAATACGAATACAGCAATAATGGGTCATCTTCTTCTTCGTCGTCCCACTTGGACGACGTTCTGGAATCGTTGCCGGAAATCGACGACCGGTGTTTCGCTTTGCCACGTGTGAACTCGATGAAGACGTGGCAGCAGCAGGAGGAGAAGCTGAATCTTCAGAATCTGAATAATGGTGGTTGCAATTTCGTGGAGTGGGCCAACCCGGCGATTCTCAACTCGGTCAACGACTTCATTTCCGGGAATCAAACACTTAACACACAACAATCTCAATCTCAAGGGGTTATGAATTACAGTTCAATCAGCGACGTCCAACATGTGCCGTCCATTCCGCCGTTGACGGTGCCGGAGGATGAGGTTCAGAGCGGAGTGAGTAGTTCCGGGTTTTATCAGACGAGCTCAAACGGGTTGACTCAGGGGTTCGGTAACTCGGTGAATGACCCGTATGGATTCAGATACTCCAATCAGACAATGGGGTTTGGGTTTAGACTTTAG 1023 0.4995 MGVPETDPLAQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLQVIGDIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTAGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKIGSTKLDDWVLCRIYKKNSGSQKPMPMMVPNKEYEYSNNGSSSSSSSHLDDVLESLPEIDDRCFALPRVNSMKTWQQQEEKLNLQNLNNGGCNFVEWANPAILNSVNDFISGNQTLNTQQSQSQGVMNYSSISDVQHVPSIPPLTVPEDEVQSGVSSSGFYQTSSNGLTQGFGNSVNDPYGFRYSNQTMGFGFRL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0630 340 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 252 - -
Mibi01g0630 340 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Mibi01g0630 340 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mibi01g0630 340 Gene3D NAC domain 23 166 IPR036093 GO:0003677|GO:0006355
Mibi01g0630 340 FunFam NAC domain-containing protein 72-like 23 167 - -
Mibi01g0630 340 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0630 Mibi-ChrMibi01 6078407 6079653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0630 1 336 NAC Transcription Factor Family AT4G27410 59.490 1.83e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g0630 NAM 3.1e-35 No_clan