Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0615 ATGAACGAGAAAGCTAACGTGTCCAAGGAGCTCAACGCCAAGCATAAAAAGATATTGGAAGGACTGCTTAAATTGCCAGAAAATAGGGAGTGCGCTGACTGCAAAGCTAAAGGGCCGAGATGGGCTAGCGTGAACTTAGGCATCTTTATATGCATGCAGTGCTCAGGAATACATCGAAGTCTAGGAGTACATATATCAAAGGTGCGTTCTGCAACTTTGGACACTTGGCTGCCAGAGCAGGTTGCCTTCATTCAATCAATGGGAAATGAGAAGGCAAATAGTTACTGGGAAGCAGAGTTACCCCCAAATTATGATAGAGTTGGAATTGAGAATTTCATTCGAGCAAAATATGAAGAGAAGAGGTGGGTGGCAAAGGATGGGAAACCAATGTCACCTTCTAGACTGCAAGGAGATAAGGCTTCTTCACACTTGCAGAGTCCTGCAGAAAGAGGTGGGCACGTATCTCATGCACCTGCTTCTGAGAATACTTTTGAGGAAAGGAAGAAAGTTCAACCATCAAATACAACTCCTGCTGCTAAATTTAGTGTTTCGGCTCCCCCAAAAGGACCTCAACTGGCAATACCTGTCATAAAACCTCAGCATGTTGAGAAAGTGGAAGCGGTGGCACCACAGCCTCAAGCTGAGATGACAAAGCCAGCTACTGATATGCCTCAGAGTACCCCTGCAAAAGTTGACTATGCTACCGATCTGTTTGACATGTTGTCTATGGATGGCCCAAGTGAAAATGATTCAAACACTGCTGCTGCCACAGCTGATGATAATAACTGGGCAGGTTTTCAGTCTGCTGCTACAGAGGCTTCAACAGCAGAGAAGACTAGTCTTACAAAAGCAGTTGAGAGTACTCCTGCCGCTTCTGGGATTGAGGATCTATTTAAAGATTCATCTTCATCTTCGGTGACGCCAAGCTTAACTCCAGAAAAACCACAGAAAGATTTAAAAAATGATATAATGAGCCTCTTTGAGAAGTCCAGTATGGTTTCTCCATTTGCAATGCATCAACAACAACTTGCCATGCTGGCACAGCAACAATCCCTTCTAATGGCCGCTGCAGCTAATTCTGCTGGTGGGGATCCTAAGAATCCTGGTAGTTTACAACAATCTGGACTGAATGGATCCAATATTGCTGCTCAAAGTTGGCCAGGTGTCAGCTACCCTATCCCTGGAGCTGTGCCAATTCCTGGTCAGGCAGAGCTATTGGAGCTCATGCAGACGGCGAACATGCCTCCAGCACAACCTGCAGGAAGTGCTGTTCAATATCCATCTGGGTTCTATATGATGGGACAAGTTGCTCCAGTTAATGGTGCGGCCCCAACGGGTGGGAGTAAAACTCAGCCAGCAGCTCCGGTATCATCAACCCCTTCACAGTCAACAGGAAAGGACTATGATTTTTCCTCTTTAACGCAAGGAATGTTTTCAAAACAATGA 1446 0.4564 MNEKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVAKDGKPMSPSRLQGDKASSHLQSPAERGGHVSHAPASENTFEERKKVQPSNTTPAAKFSVSAPPKGPQLAIPVIKPQHVEKVEAVAPQPQAEMTKPATDMPQSTPAKVDYATDLFDMLSMDGPSENDSNTAAATADDNNWAGFQSAATEASTAEKTSLTKAVESTPAASGIEDLFKDSSSSSVTPSLTPEKPQKDLKNDIMSLFEKSSMVSPFAMHQQQLAMLAQQQSLLMAAAANSAGGDPKNPGSLQQSGLNGSNIAAQSWPGVSYPIPGAVPIPGQAELLELMQTANMPPAQPAGSAVQYPSGFYMMGQVAPVNGAAPTGGSKTQPAAPVSSTPSQSTGKDYDFSSLTQGMFSKQ 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0615 481 MobiDBLite consensus disorder prediction 444 481 - -
Mibi01g0615 481 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Mibi01g0615 481 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Mibi01g0615 481 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Mibi01g0615 481 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Mibi01g0615 481 MobiDBLite consensus disorder prediction 358 379 - -
Mibi01g0615 481 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 481 IPR044520 GO:0005096
Mibi01g0615 481 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Mibi01g0615 481 MobiDBLite consensus disorder prediction 125 189 - -
Mibi01g0615 481 CDD ArfGap 19 117 - -
Mibi01g0615 481 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Mibi01g0615 481 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
Mibi01g0615 481 MobiDBLite consensus disorder prediction 275 318 - -
Mibi01g0615 481 MobiDBLite consensus disorder prediction 297 314 - -
Mibi01g0615 481 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Mibi01g0615 481 MobiDBLite consensus disorder prediction 440 481 - -
Mibi01g0615 481 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Mibi01g0615 481 MobiDBLite consensus disorder prediction 365 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0615 Mibi-ChrMibi01 5934807 5940131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0615 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 3.97e-30 118