Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0612 ATGATGTCATCGCCTACGAATTCAGCGACAATGAGGAGCTCGCTAGAGGAAATGCTAGAATCAATCCGGCGGAGAGGAGAAGAAGAGAAGCCAAAGGATTCGCCGCCGGCATTGCCAGCTCGTCCGAGGTCTAAAGCTCGCCTTCCCTCGGCGAGACGCCCATTGTCGAATACATTTAGGATTGAAGATTATCAGAATGCAGCCACAAGCTCCAAGAACAATTCCAATGCAAAGGTAAAAGAAGAGACCAAGGACAAAGAAGTGGGTGTGAGACATAAGAGAAAAGGAAGTTTTGCTAGCAAGAAGATGAAGGAAGACATTGAATCGCCTTATATCGTGACACCGGAAGAAAATATGAGCCAACCATCGCCAGAGGATCCTGTTTCAGCATCTCCCGCTTCCATATCAACATCAGGGAAGATTCAGGAATTGGATGGTGATGATAATGTTTCTTATTACATAAAAAAGAAACTGCGTGTTTGGTGTAGGCCGCCAAGTGGAAACTGGGAACTAGGACAGATACAATCATCTTCAGGAGAAGAAGCTCTTGTTTCGCTCTCAAGTGGAGATATGATGAAAGTGGCAAGGTCAGAGCTTTTGCCAGTTAATCCAGATATTGTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAGCCCTCAGTTCTTCATAATCTCCGGTTTAGATATTCTCAGGACATGATATATGTACGACCTGTTTTGATTGCCCTCAACCCCTTCAAAGAAATCCAGATATATGGAAATGAATATATCTCGGCTTATAGGCAGAAGATTATAGATAGTCCTCACGTTTATGCTATAGCAGATGTGGCTTTTAATGAGATGATGAGAGATGAAGTAAACCAATCCATCATTGTAAGTGGCGAGAGTGGAGCCGGGAAGACAGAGACAGCAAAGTTTGCCATGCAATACTTAGCAGTTTTGAGTGGCAGCAGTTGCGGGATAGAAAAGGAAATCCTTCAGACGAATTATATACTAGAAGTTTTTGGGAATGCAAAAACATCTCGGAATGACAACTCTAGTAGATTTGGAAAGTTGATTGAGATTCATTTCACCACGGTTGGGAGGATATGTGGAGCCAAAATTCAAACATGTAAGCATGTTCAATCAAGAGTTGTTCAACTGGCCAGCGGTGAAAGGTCGTATCACATCTTTTATCAACTTTGCGCTGGTTCTTCGCCTGATCTTAAAGAGAGCCTGAATCTTAAAGCTGCTAGTGAGTATAAATATCTCAATCAAAGTGACTGCATGACAATTGATGGTACTGATGATGCTAAAAAGTTTCCACTGGATGATGTTCGAATTAGCAAAGAGGATCAAGAGCTAGTCTTCAAGATGATTGCTGCAGTACTGTGGCTGGGAAATATATCATTCCAAGTAAATGACAATGAAAATGACATCGAGGTTGTAAACGATGAAGCTGTTAGCAGTGCTGCTCTGCTAATGGGTTGCAGTTCCCAGGATTTAATGGTAACCTTATCTACCCGGAAAATCCAAGCTGGCAAAGATACTATTTCCAAGAAGTTGACATTGTGGCAGGCAACTGACACAAGGGATGCATTGGCAAAGTTCATATATGCAACATTGTTCGACTGGCTTGTAGAACAAATTAACAAGTCACTTGAAGTGGGTAAACGCTGCACTGGGAGATCCATAAGTATTCTTGATATCTATGGATTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCCAATGAGAGACTCCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGATGACTATGAATTGGATGGCGTTGATTGGACAAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGAAACCTATGGGGCTGATCTCTCTGTTGGATGAGGAATCAAATTTCCCAAAGGCTACTGATCTAACATTTGCCAACAAAGTTAGACAGCACCTGAATGCTAATCCTTGTTTCAAAGGGGAGAGAGGCAGAGCTTTTCATGTCCGTCATTATGCCGGGGAGGTTGTGTATGACACAAATGGATTTTTAGAAAAGAACAGAGATCCGCTGCCTCCAGATTCACTTAAACTCCTGTCATCATGTAATTGTAAACTGCTGCAGTTGTTCTCCAAAATGGTTGATCAATCTAAGCACTCAAATTCCTCCCACGTAGGCGCATTGGGCTCACAAAAGCAGAGTGTTGGGACTAAGTTCAAGGGTCAATTATTCAAGCTGATGAATCAGTTGGAGGGCACCACACCTCATTTTATTCGCTGCATAAAGCCCAATGCCAAGCACCTTGCTGGAATATATGATGAGGGCCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGTCTGGATATCCCACTCGAATGATGCATCAAGAATTTGCTGGAAGGTATGGGTTTTTGCTTTCTGAGGCTAGCCTATCTCAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTTAATATCCCTCCTGAAATGTACCAAGTCGGCTTCACAAAACTGTATCTTCGAACAGGCCAGATTGGTGTCCTCGAGGACAGGAGGAAACACGTTATACTGGCAATAGTTGAGGTTCAGAAATGGTTACGTGGTTATCAAGCTCGCCGAAACTTTCACATCCTCAAGGACGGAGCAATATCTTTACAATCAATTGTTCGTGGAGATATTGCGAGAAAGACATATCATGCGATGAAGTTAGCTTCTATTGCTTCTGAAAAGCTTCATCAGGCCCAGGCAATCACACGTCTTCAATCTGTGATCCGTGGTTGGTTGGTTCGAAGGCGTGCTAATAGTCTCATTCATAGGTTGAAGAAGGATGCTAAAAACTCTAAACATAAGTACAAGTCACGTTCTAAGATGTTTGAAGTGAAGGATTTCTCCAAAGAGCAGCTTCAGAATCTGCCATCAACTTTGGCAGAACTTCAGAACCGGGTTGTCAAAGCTGAAGCAACTTTGAAGCAAAAGGAAGAGGAAAATACAGCATTGAGGGAACAACTAAAACAATTCGAGACAAGGTGGATTGAGTATGAGATGAAGATGAAATCAATGGAACACATGTGGCAAAAACAGATGGCATCTTTGCAAAAGACTCTTTCAGTTGCAAGGAGGAGCCTCACTGCTGAGAATTCCACTGATCAACCTGGAAGATGTGAAACTATGTCACCTTGCTTCTATGACTCAGAAGATGCTACTTCCGTGGAATCTAAGACACCCATGGGCAGCACACCGATTAAGTTTCCTAGCACTCCTTATGAGAATGGAGCAATAAGAGAGGCCAATGATACTTTTAATGCAGTGAGCAACCTCATGAAAGAATTTGAGCAGCGGAAACAGACTTTTGATGATGATGCTAGAGCTCTACTTTTGGTTAGATCGGGGCAGCCTGCTCAAATGAATCCCAACGAAGAATTCCGGCTGCTTAAACGCCGATTTGAAGGATGGAAGAAGGAATACAAGGGACGATTACGGGAAACAAAAGCAAGACTTTCTAAGACATGGAGCCCAGAAGCTGAAATTAGTTGTCAAAAGTGGTGGGGTAAAATAAGCTCAAGAGGACTATAG 3624 0.4225 MMSSPTNSATMRSSLEEMLESIRRRGEEEKPKDSPPALPARPRSKARLPSARRPLSNTFRIEDYQNAATSSKNNSNAKVKEETKDKEVGVRHKRKGSFASKKMKEDIESPYIVTPEENMSQPSPEDPVSASPASISTSGKIQELDGDDNVSYYIKKKLRVWCRPPSGNWELGQIQSSSGEEALVSLSSGDMMKVARSELLPVNPDIVEGVDDLIQLSYLNEPSVLHNLRFRYSQDMIYVRPVLIALNPFKEIQIYGNEYISAYRQKIIDSPHVYAIADVAFNEMMRDEVNQSIIVSGESGAGKTETAKFAMQYLAVLSGSSCGIEKEILQTNYILEVFGNAKTSRNDNSSRFGKLIEIHFTTVGRICGAKIQTCKHVQSRVVQLASGERSYHIFYQLCAGSSPDLKESLNLKAASEYKYLNQSDCMTIDGTDDAKKFPLDDVRISKEDQELVFKMIAAVLWLGNISFQVNDNENDIEVVNDEAVSSAALLMGCSSQDLMVTLSTRKIQAGKDTISKKLTLWQATDTRDALAKFIYATLFDWLVEQINKSLEVGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQDDYELDGVDWTKVDFEDNQECLDLFEKKPMGLISLLDEESNFPKATDLTFANKVRQHLNANPCFKGERGRAFHVRHYAGEVVYDTNGFLEKNRDPLPPDSLKLLSSCNCKLLQLFSKMVDQSKHSNSSHVGALGSQKQSVGTKFKGQLFKLMNQLEGTTPHFIRCIKPNAKHLAGIYDEGLVLQQLRCCGVLEVVRISRSGYPTRMMHQEFAGRYGFLLSEASLSQDPLSISVSVLQQFNIPPEMYQVGFTKLYLRTGQIGVLEDRRKHVILAIVEVQKWLRGYQARRNFHILKDGAISLQSIVRGDIARKTYHAMKLASIASEKLHQAQAITRLQSVIRGWLVRRRANSLIHRLKKDAKNSKHKYKSRSKMFEVKDFSKEQLQNLPSTLAELQNRVVKAEATLKQKEEENTALREQLKQFETRWIEYEMKMKSMEHMWQKQMASLQKTLSVARRSLTAENSTDQPGRCETMSPCFYDSEDATSVESKTPMGSTPIKFPSTPYENGAIREANDTFNAVSNLMKEFEQRKQTFDDDARALLLVRSGQPAQMNPNEEFRLLKRRFEGWKKEYKGRLRETKARLSKTWSPEAEISCQKWWGKISSRGL 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0612 1207 Gene3D - 874 924 - -
Mibi01g0612 1207 Gene3D - 804 871 - -
Mibi01g0612 1207 CDD MYSc_Myo8 222 858 IPR036022 -
Mibi01g0612 1207 Gene3D Myosin VI head, motor domain, U50 subdomain 441 549 - -
Mibi01g0612 1207 MobiDBLite consensus disorder prediction 17 36 - -
Mibi01g0612 1207 MobiDBLite consensus disorder prediction 1 15 - -
Mibi01g0612 1207 SMART MYSc_2a 202 871 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 ProSiteProfiles IQ motif profile. 875 901 IPR000048 GO:0005515
Mibi01g0612 1207 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 155 204 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 FunFam Myosin IE heavy chain 441 549 - -
Mibi01g0612 1207 MobiDBLite consensus disorder prediction 1 102 - -
Mibi01g0612 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 922 IPR027417 -
Mibi01g0612 1207 MobiDBLite consensus disorder prediction 77 102 - -
Mibi01g0612 1207 SMART iq_5 871 893 IPR000048 GO:0005515
Mibi01g0612 1207 SMART iq_5 929 951 IPR000048 GO:0005515
Mibi01g0612 1207 SMART iq_5 894 916 IPR000048 GO:0005515
Mibi01g0612 1207 MobiDBLite consensus disorder prediction 1087 1102 - -
Mibi01g0612 1207 PRINTS Myosin heavy chain signature 290 315 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 PRINTS Myosin heavy chain signature 333 360 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 PRINTS Myosin heavy chain signature 560 588 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 PRINTS Myosin heavy chain signature 613 641 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 PRINTS Myosin heavy chain signature 236 255 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 MobiDBLite consensus disorder prediction 1087 1107 - -
Mibi01g0612 1207 Coils Coil 985 1026 - -
Mibi01g0612 1207 Gene3D - 572 760 - -
Mibi01g0612 1207 ProSiteProfiles IQ motif profile. 930 959 IPR000048 GO:0005515
Mibi01g0612 1207 Gene3D Kinesin motor domain 207 803 IPR036961 -
Mibi01g0612 1207 Coils Coil 1110 1130 - -
Mibi01g0612 1207 FunFam Myosin heavy chain 389 440 - -
Mibi01g0612 1207 MobiDBLite consensus disorder prediction 114 142 - -
Mibi01g0612 1207 MobiDBLite consensus disorder prediction 59 76 - -
Mibi01g0612 1207 FunFam Unconventional myosin-XIX 572 760 - -
Mibi01g0612 1207 Pfam IQ calmodulin-binding motif 875 893 IPR000048 GO:0005515
Mibi01g0612 1207 Pfam IQ calmodulin-binding motif 932 949 IPR000048 GO:0005515
Mibi01g0612 1207 PANTHER MYOSIN 202 1190 - -
Mibi01g0612 1207 ProSiteProfiles Myosin motor domain profile. 208 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 ProSiteProfiles IQ motif profile. 895 924 IPR000048 GO:0005515
Mibi01g0612 1207 Pfam Myosin head (motor domain) 210 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi01g0612 1207 Gene3D - 389 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0612 Mibi-ChrMibi01 5911557 5924819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0612 1 1201 Myosins gene family AT5G54280 59.775 0.0 1474