Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0611 ATGGCAACTCCAGAGATACTGAACTCACGTGCCTCGCGCGTGCACGACAATACCCACCACTCAACAACAGACGACGACGAGGACGACACGGACAGCATGGAGGAGGAGGAGGAGTCCGATGAAGAAGAAGAGGCGGAGGGCGAGGGTGGGGGGAAGGTGTTGGACCCGAGGGCCAAGTGGGTCCAAGAATGGAACAGGGTGTTCCTTCTTGTGTGCGCCATGGGGCTGTTCGTGGACCCACTCTTCTTCTACGCCCTATCGGTGAGCGACACGTGTATGTGCCTGTTCGTGGACGGGTGGTTCGCCGTCACCGTCACGGCCCTCCGCTGCATGACCGACGCCTTCCACCTCTGCAACATGTGGCTCCACTTCAAAATGGGGAGGCGCCGCCACTTCGGCACTGGCTTCTCCCTCCCCCCGGGCCCCACCACCCCTCGCTTGGCCGCTCTTCGCTATCTCAAGCTCAAGACCGGCTTCTTCTTCGACCTCTTCGTCATCCTCCCTCTTCCCCAGATTGTGCTATGGGTTACAATCCCGTATCTGTTGGAGAAAGGGTCAGTGACATTGGTGATGACGGTGTTCGTAATAATGTTTCTGTTTCAATATCTTCCAAAGATATACCACTCTGTTTGCCTCTTGCGCCGCCTTCAAAACCTCTCTGGCTACATTTTTGGCACTGTTTGGTGGGGAATTGCCCTCAACTTGATCGCCTATTTCGTCGCCTCCCATGCGGCAGGGGCGTGCTGGTACTTGCTAGGGATTCAGAGGGCAGCCAAGTGTCTGAAAGAGCAATGTGGGAGAACAAACGGGTGTGGGTTAAGGATATTGTCGTGTAAGGAACCAATATATTATGGGACAAGTGGGATGGTGAGGGATAGAGCAAGACTTTTGTGGGCCGAGAACAGGCAAGTCAGGTCAACCTGCTTGGATACCTCCGATAACTATAACTACGGAGCTTATAAATGGACCGTCCAGCTTGTCACCAACGATAGCCGACTTGAAAAGATCCTCTTTCCTATCTTTTGGGGCCTCATGACTCTCAGCACTTTCGGGAACCTAGAGAGCACAACAGAATGGCTCGAAGTGGTGTTCAACATTATTGTTTTGACCAGTGGACTCATTCTCGTCACCATGTTGATTGGAAACATCAAGGTGTTTCTGCATGCAACGACATCAAAGAAGCAAGCGATGCAGCTGAAGATGAGGAACATAGAATGGTGGATGAGGAAGAGGCACCTTCCTTCGGGTTTCCGGCAGCGAGTGCGCAACTACGAACGGCAGCGATGGGCGGCGATGCGAGGAGTGGACGAGTTCGAGATGATCAGAAACCTGCCGGAGGGCCTCCGTAGAGACATCAAGTACCATCTCTGCCTCGACCTCGTCCGCCAGGTTCCGTTATTTCAGCACATGGATGAGCTTGTGCTGGAAAATATCTGCGACCGCGTTAAGTCACTCATCTTCACTAAGGGAGAAACGATAACGAGGGAGGGAGATCCAGTACAGAGGATGCTGTTCGTGGTGAGGGGGCACCTGCAGAGCAGCCAGGAGCTAAGAGACGGAGTGAAGAGTTACTGCATGCTGGGGCCTGGCAACTTCAGCGGAGACGAGCTACTCTCATGGTGTCTGAGGAGGCCATTCATAGAGAGGTTGCCACCTTCCTCATCAACCCTCAGAACACTGGAGACAACCGAGGCCTTTGGGCTGGAGGCCCAGGACGTCAAGTACGTGACCCAGCACTTCAGGTACACTTTCATGAACGACAAGGTCAAGAGGAGCGCCAGGTATTACTCTCCTGGTTGGAGGACTTGGGCCGCCGTCGCCATCCAGCTCGCTTGGCGCCGCCATAAGCATCGTTTGACTTTGACCTCCTTGTCCTTCATCAGGCCTCGCAGGCCTCTCTCTCGCTGCTCTTCCCTTGGAGAAGACAGGCTTCGCCTCTACACTGCCTTGTTGACCTCACCCAAGCCTAATCATGACCATTTTGACTTTTGA 1992 0.5407 MATPEILNSRASRVHDNTHHSTTDDDEDDTDSMEEEEESDEEEEAEGEGGGKVLDPRAKWVQEWNRVFLLVCAMGLFVDPLFFYALSVSDTCMCLFVDGWFAVTVTALRCMTDAFHLCNMWLHFKMGRRRHFGTGFSLPPGPTTPRLAALRYLKLKTGFFFDLFVILPLPQIVLWVTIPYLLEKGSVTLVMTVFVIMFLFQYLPKIYHSVCLLRRLQNLSGYIFGTVWWGIALNLIAYFVASHAAGACWYLLGIQRAAKCLKEQCGRTNGCGLRILSCKEPIYYGTSGMVRDRARLLWAENRQVRSTCLDTSDNYNYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLILVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRHLPSGFRQRVRNYERQRWAAMRGVDEFEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQELRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLRTLETTEAFGLEAQDVKYVTQHFRYTFMNDKVKRSARYYSPGWRTWAAVAIQLAWRRHKHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0611 663 Pfam Ion transport protein 64 383 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi01g0611 663 Gene3D Jelly Rolls 464 582 IPR014710 -
Mibi01g0611 663 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 36 622 - -
Mibi01g0611 663 ProSiteProfiles cAMP/cGMP binding motif profile. 466 576 IPR000595 -
Mibi01g0611 663 MobiDBLite consensus disorder prediction 12 26 - -
Mibi01g0611 663 FunFam cyclic nucleotide-gated ion channel 4 464 582 - -
Mibi01g0611 663 SUPERFAMILY Voltage-gated potassium channels 56 387 - -
Mibi01g0611 663 CDD CAP_ED 466 572 IPR000595 -
Mibi01g0611 663 Pfam Cyclic nucleotide-binding domain 487 574 IPR000595 -
Mibi01g0611 663 SMART cnmp_10 466 595 IPR000595 -
Mibi01g0611 663 SUPERFAMILY cAMP-binding domain-like 392 580 IPR018490 -
Mibi01g0611 663 Gene3D Helix hairpin bin 391 457 - -
Mibi01g0611 663 MobiDBLite consensus disorder prediction 1 53 - -
Mibi01g0611 663 MobiDBLite consensus disorder prediction 27 48 - -
Mibi01g0611 663 FunFam Cyclic nucleotide-gated ion channel 1 393 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0611 Mibi-ChrMibi01 5895173 5901301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0611 51 662 Ion Channels AT5G54250 80.875 0.0 1019