Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0604 ATGACGAAGCCTTCTTCTAACGATCATTCAAAGAATAATGGATTGAAGAAAGGTCCTTGGACTCCCGAAGAAGATCAGAAACTTATCGATTATATTCACAAACATGGACACGGCAAATGGCGTACTCTTCCCAAGAATGCTGGACTTAAGAGATGTGGGAAGAGTTGCCGGCTGCGCTGGACAAACTACTTGAGGCCAGATATAAAGAGAGGCAGATTCTCATTCGAGGAAGAGGAAACCATCATCCAGTTACATAGTGTTCTGGGAAACAAGTGGTCCACGATTGCTGCTAGCTTGCCAGGAAGAACAGATAATGAGATAAAGAATTATTGGAATACTCACATCAAGAAGAGACTGTTGAAGATGGGGATTGATCCAGTGACTCACACCCCATGCTTGGATATTCAACAGCTCTCCTCCATTCTCAACTCTTCTCTCTACAATTCACCTCATTTAATCAACCCTCCTCCTCACTTTGGAATGGAAAACAATAATATATTAAATCCAAACCTTTTAAGCTTGCTTACTGCTTTCCTATCATCATCATCTCAGTACCCAGATATTGCTCCCAATCAAAATTTCCAGCAAAATTACCAAACCCTCCCTCTTCAAGAAAACCAAGCCTGTGCTGCTTCATCACAGCCTAATTTACCTCTGGAATCTCAACTCATGAAAGCAAAACAAGATCAAATGATCTCTCCAGATGCCACTAGTTTCAGCTTCCCAAGTAGCATCCCGAATGTGGGGCAGTACGAAGGAGGTCATCATCATAATCATAATTACTCTACCAGTCTTTTGGAGAATCATCCGATTGCACAAAACAACACAAGAGGTGTTCCGAATTTCACTAATTTAGGGTCATTGATATCGTACTCGACGACTACCCCTTCATCTTCTACTAGTCCCAGTACTTTGAATTCGTCAGCATCTTCCACAACGTTCGTCAAGGGTGTCACTGAAGAGGAAAAGGACACTTATTGCAGCAACAACATGTTCATGTATAACATCTCCAACGCCTTAAACAATATTGATGCCTCTTGTCTTTTGTGA 1050 0.4171 MTKPSSNDHSKNNGLKKGPWTPEEDQKLIDYIHKHGHGKWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHTPCLDIQQLSSILNSSLYNSPHLINPPPHFGMENNNILNPNLLSLLTAFLSSSSQYPDIAPNQNFQQNYQTLPLQENQACAASSQPNLPLESQLMKAKQDQMISPDATSFSFPSSIPNVGQYEGGHHHNHNYSTSLLENHPIAQNNTRGVPNFTNLGSLISYSTTTPSSSTSPSTLNSSASSTTFVKGVTEEEKDTYCSNNMFMYNISNALNNIDASCLL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0604 349 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Mibi01g0604 349 Pfam Myb-like DNA-binding domain 70 114 IPR001005 -
Mibi01g0604 349 CDD SANT 19 64 IPR001005 -
Mibi01g0604 349 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Mibi01g0604 349 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Mibi01g0604 349 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Mibi01g0604 349 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 286 - -
Mibi01g0604 349 CDD SANT 72 115 IPR001005 -
Mibi01g0604 349 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g0604 349 FunFam MYB-related transcription factor 16 69 - -
Mibi01g0604 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Mibi01g0604 349 Gene3D - 72 119 - -
Mibi01g0604 349 Gene3D - 14 70 - -
Mibi01g0604 349 FunFam Transcription factor MYB39 72 133 - -
Mibi01g0604 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Mibi01g0604 349 SMART sant 16 66 IPR001005 -
Mibi01g0604 349 SMART sant 69 117 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0604 Mibi-ChrMibi01 5819731 5821205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0604 11 231 MYB Transcription Factor Family AT4G21440 59.389 6.39e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0604 Myb_DNA-binding 6.5e-17 CL0123