Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0597 ATGCGTCTACGCCCTAACGAACTGCGTGCTTTACCTGGAAATTTCTCTCTTCAAGTTGACACATCCACAGGGAGGCAGAGGCTAATCATAAGGAGGAATTCAGAGATATACTGGGTGAGCGATGAACAATCCTACTTCACCTTTCAAATTTTTAACAACCGAAGCAGTGTTATATGGGAGGCGGGCTATTTGGTTTGGCAAGGAGACAATACTTCTCGTTTGGTTCTGGAAGTTTCTGGTGAGCTTAACCAGCAAATATGGTCTCAAGATAACAATCAATGGGTTTCTCTGCTCTCATCCAAGTGCGGCAGAAATGCAATTTGCGGATATTTTGGCATTTGTAACCCTCAAACCATTGATCCTTGCGAGTGTTTCCAAGGTTTTAAGCCTTACAATGAAGATTCTTGGAAAAAGGGGGACACTTTCGCAGGTTGTGTCAGAAAAACAGAGTTGCCCTGCACAAACGGGAGTAGTACTGATGGATTGGGTGACGGGTTTTTGCGGTTCGATAGGGTGGAGTTTCCTTCAGATACTCCGCTTGCCTTCAAAACTGAGAATGCACTCACATGTCGAAGATACTGCTCAACCAATTGTTCTTGCGTTGCTTATGCTTACGATGTTATGGGTAGTTGCTTGTTCTGGCTTGATCGTGTGTTGAATCTGAAGAACGTCTCGGTTGACGTTAGAGATGACAATTCCAGACCAAGTTTCTATCTCAAACTGGCTCTCTCTGACTTGAATAACAACAATGGAGCTCTATTTGCTTGCTACTGCAGGAGAAGGAAGCTTAGGGGAGAAGGCATGAGCATGAAAGTTGAGATGTCAGAGCTTAGTGATGTGGATAAGGCTGGGAAAGTTAACAAGAGGGATGTCAAATTGCCATTGTTTAGCTTTGCAAGTGTTTCTGCGGCAACTGATAACTTTTCTCCTGAAAATAAACTTGGTGATGGTGGCTTTGGACCTGTTTACAAGGGTAAGCTGTTGAATGGGGATGAGGTTGCTGTCAAAAGGCTATCTGCAAGATCAGATGACCCAAGTCCTGGAAATTTCTCTCTTCAAGTTGACAATTCCGCAGAGAGGCAGAGGCTAATCATAAGGAGAAATTCAGAGATATACTGGGTGAGCGATGAACAATCCAATTTCACCTTTCAAAGTTTTAACAACCGAAGCAGTGTTATATGGGAGGCGGGCTATTTGGTTTGGCAAGGAGACAATACTTCTCGTTTGGTTCTGGAAGTTTCTGGTGAGCTTAACCAGCAAATATGGTCTCAAGATAACACTCAGTGGGTTCCTCTGCTCTCATCCAAGTGCGGCAGAAATGCAATTTGCGGAGATTTTGGCATTTGTAACCCCCAATCCAATGATCCTTGCGAGTGTTTCCAAGGTTTTAAGCCACACAATGAAGATTCTTCGAAAAAGGGGGACACTTTCGCAGGTTGTGTCAGAAAAACAGAGTTGCTTTGCACAAACGGGAGTAGTACTGATGGATTGGGTGACGGGTTTTTAAGGGTCGACAAAGTGGAGTTTCCTTCAGATAGTCCGCTTGCTTTCATAACTGAGAACGCATCCACATGTCAAACATATTGCTCAACAAATTGTTCTTGCGTCGCTTATGCTTATGATGTTAAGGGTCGTTGCTTGTTCTGGCTTGATAGTGTATTGAATCTGAAGAACGTCTCTGTTGACGTTAGAAATGATAATTCTAGACCAAGTTTCTATCTCAAACTGGCTCACTCTGACTTGAATAACAACAATGGGAGTAATCCAGATCATAAGGCTAATAAAAGCAGGAAGACGTTACTAACAGTTGTGATTGTTATCTTATTTGTGGCATTGCTTATAGGAGCTCTATTTGCTTGCTACTGCAGGAGGAGAAAGCCTAGGGGAGAAGGCATGAGCATGAAATTTGAGATGTCAGAGCTTAGTGATGTGGATAAGGCTGGGAAAGTCAACAAGACGGATGTCAAATTGCCATTGTTTAGTTTTGCAAGTGTTTCTGCGGCAACCGATAACTTTTCACCTGAAAATAAGCTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGTTGCTGTCAAAAGGCTATCTGCAAGATCAGATGCAGCAAAACGGAGAATTCTCGATTGGGAAACACGAGTTCGCATAATTAATGGGATTGCTCAAGGCCTTCTTTATCTTCACCAATATTCTAGATTCCGAATCATTCACAGAGATCTCAAAGTTAGCAATATTTTGTTGGACATCGACATGAATCCCAAAATATCAGATTTTGGAATGGCAAGACTATTTGGTGGAAATGAATTACAAGCAAATACAAATCGGATAGTTGGCACCTATGGTTATATGTCACCTGAATATGCATTAGAAGGCATTTTCTCAATAAAATCAGATGTGTTTAGCTTTGGAGTCCTTTTGTTGGAAATAATAAGTGGCAAAAAGAATACTGGTTTGTATAACACAAACTCCCTCAATCTTCTTGGATATGCATGGGACCTATGGACAAGTGGGAGAGGAATAGAGCTGATGGATGCATCATTAGAGGATGCATTCATAAAGAAAATGGCTGTGCTAAGATATGTGAACATAGCACTGCTTTGTGTTCAAGAAAGTGCAGAAGACAGGCCAACCATGTCTGATGTTGTTTCAATGCTTGGGAATGACAGTATAGTACTTCCTTTTCCTAAGCCCGTAGCATTCCTCAATGTAAGAGGCATCATCAGGAGTTCAAGATCATCAGAGGGAAGCTCAGCAGAAAATGCTTCTATCAATAACATGACTGCTTCTGTCATGGAAGCAAGATGA 2799 0.4216 MRLRPNELRALPGNFSLQVDTSTGRQRLIIRRNSEIYWVSDEQSYFTFQIFNNRSSVIWEAGYLVWQGDNTSRLVLEVSGELNQQIWSQDNNQWVSLLSSKCGRNAICGYFGICNPQTIDPCECFQGFKPYNEDSWKKGDTFAGCVRKTELPCTNGSSTDGLGDGFLRFDRVEFPSDTPLAFKTENALTCRRYCSTNCSCVAYAYDVMGSCLFWLDRVLNLKNVSVDVRDDNSRPSFYLKLALSDLNNNNGALFACYCRRRKLRGEGMSMKVEMSELSDVDKAGKVNKRDVKLPLFSFASVSAATDNFSPENKLGDGGFGPVYKGKLLNGDEVAVKRLSARSDDPSPGNFSLQVDNSAERQRLIIRRNSEIYWVSDEQSNFTFQSFNNRSSVIWEAGYLVWQGDNTSRLVLEVSGELNQQIWSQDNTQWVPLLSSKCGRNAICGDFGICNPQSNDPCECFQGFKPHNEDSSKKGDTFAGCVRKTELLCTNGSSTDGLGDGFLRVDKVEFPSDSPLAFITENASTCQTYCSTNCSCVAYAYDVKGRCLFWLDSVLNLKNVSVDVRNDNSRPSFYLKLAHSDLNNNNGSNPDHKANKSRKTLLTVVIVILFVALLIGALFACYCRRRKPRGEGMSMKFEMSELSDVDKAGKVNKTDVKLPLFSFASVSAATDNFSPENKLGEGGFGPVYKVAVKRLSARSDAAKRRILDWETRVRIINGIAQGLLYLHQYSRFRIIHRDLKVSNILLDIDMNPKISDFGMARLFGGNELQANTNRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIISGKKNTGLYNTNSLNLLGYAWDLWTSGRGIELMDASLEDAFIKKMAVLRYVNIALLCVQESAEDRPTMSDVVSMLGNDSIVLPFPKPVAFLNVRGIIRSSRSSEGSSAENASINNMTASVMEAR 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0597 932 SMART serkin_6 672 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0597 932 Pfam S-locus glycoprotein domain 44 131 IPR000858 GO:0048544
Mibi01g0597 932 Pfam S-locus glycoprotein domain 384 466 IPR000858 GO:0048544
Mibi01g0597 932 SMART ntp_6 496 571 IPR003609 -
Mibi01g0597 932 SMART ntp_6 161 241 IPR003609 -
Mibi01g0597 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Mibi01g0597 932 ProSiteProfiles PAN/Apple domain profile. 488 577 IPR003609 -
Mibi01g0597 932 CDD PAN_AP_plant 493 577 - -
Mibi01g0597 932 CDD PAN_AP_plant 149 242 - -
Mibi01g0597 932 SUPERFAMILY Protein kinase-like (PK-like) 291 342 IPR011009 -
Mibi01g0597 932 Gene3D Transferase(Phosphotransferase) domain 1 693 888 - -
Mibi01g0597 932 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 706 908 - -
Mibi01g0597 932 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 692 891 - -
Mibi01g0597 932 Pfam Protein tyrosine and serine/threonine kinase 704 883 IPR001245 GO:0004672|GO:0006468
Mibi01g0597 932 ProSiteProfiles PAN/Apple domain profile. 153 242 IPR003609 -
Mibi01g0597 932 SUPERFAMILY Protein kinase-like (PK-like) 658 905 IPR011009 -
Mibi01g0597 932 ProSiteProfiles Protein kinase domain profile. 308 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0597 932 Gene3D Phosphorylase Kinase; domain 1 278 363 - -
Mibi01g0597 932 Pfam PAN-like domain 498 555 IPR003609 -
Mibi01g0597 932 Pfam PAN-like domain 163 220 IPR003609 -
Mibi01g0597 932 PIRSF SRK 698 932 IPR024171 GO:0004674
Mibi01g0597 932 PIRSF SRK 339 704 IPR024171 GO:0004674
Mibi01g0597 932 PIRSF SRK 6 344 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0597 Mibi-ChrMibi01 5684351 5695449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0597 605 899 Receptor kinase-like Gene Family AT4G23280 48.896 2.68e-83 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0597 PK_Tyr_Ser-Thr 1.7e-24 CL0016