Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0594 ATGGCATCTCAAAACCCACAAGTCAATTTCCATGATTTCTTGCCTATTATGGCCCACAAGCTCGGTGGAGATGGCTTGATAGATGAGCTGTGCAATGGGTTTGATCTTTTAATGGATTCTGGTAAAGGAGTCATCACGTTCGGCAGCCTCAAGAGGAATTCCGCTTTGCTGGGTCTACAGGATTTTGCCGATGAAGATCTTCGCTCTATGCTGAGAGAAGGTGATTTTGACGGTGATGGCGCCCTGAATCAGTTAGAATTTTGCGTTTTGATGTTCAGGTTGAGTCCTGAACTTATGGAGGGATCAAAATTGTGGTTACAGGAAATATTTCAGCAAGAACTCACAGATTATATTTCCGGTGATAGTCGGGATCTGTATATTCGGATGAAAACTTCTAAGATAGCTGTGAAAGGTGGCCATAAGATGAAGGTGGCTGCGATTATCGTCATTGCTGCCTCAGTTGTTGTGATAATTTTGATTTTCCTCTACATTGGCAAGACCATGAAATTGTTTACAGAGGAAACAGAGCATAGCCTAACGGCATTGTATCATGATGAAGATGACCAAGAAGATTTAGAGCTTCCTTTCCTTGACCTCCCAACAATTGTCAAAGCAACTGATGACTTCTCACTCAGCAAGAAACTTGGACAAGGTGGATTTGGGGCTGTATACAGGGGTATACTTGTGGATGGAAAAGAAATTGCAGTGAAGAGGCTTTCACAAAGTTCTGGACAAGGGTTGAGTGAATTCAAGAACGAAGTCATATTGATATCCAAGCTACAGCATCGAAATCTTGTTAAACTTCTTGGTTGTTGCATTGATGGAGAGGAGAAGATGCTCATCTACGAGTATATGCCCAACAAAAGCTTGGATTCTTTTATCTTTGATAATGCAAAATGTAAGATTCTAGATTGGCCTAAGCGCTTCAATATTATTTGTGGAATTGCTCGAGGGCTTTTGTATCTTCATCAAGATTCTAGGTTGAGGATCATACATAGAGATCTTAAAGCAAGTAATATTTTACTTGATAGTGAGTTGAATCCAAAAATTTCAGATTTTGGCATGGCTAAAACTTTTGGGGGTGATCAGACTGAAGGAAATACTAACAGAGTGGTTGGAACATATGGTTACATGGCACCTGAATATGCTATTCATGGACTATTCTCAGTGAAATCGGATGTATTTAGTTTTGGTGTATTGTTACTGGAGATAGTAAGTGGAAAAAAGAACAGAGAATTCATCCATTCAAACATGAGTCTCAACCTAATTGGCCATGCATGGAGACTTTGGAAAGAAGGCAGACCTTTAGAATTAATAGATTCATGCTTGGATGATCTATTTGATCTATCTGAAGCATTGCGTTGCATCCACATCGGCCTTGTATGCCTGCAACAACATCCTGAAGATAGGCCAAGTATGTCTAATGTGGTTGTTATGTTAAGCAGTGAGAGTGTCTTACCCGAACCTACAGAACCTGCTTACATCATAGAGAAGAAATTTTCTGAGACGGACTCTTGTTGCAAGAATCAGTTTTCTTCAACTAATGAAATAACTGTCACCATGTTAGAGCCTAGATAG 1578 0.3999 MASQNPQVNFHDFLPIMAHKLGGDGLIDELCNGFDLLMDSGKGVITFGSLKRNSALLGLQDFADEDLRSMLREGDFDGDGALNQLEFCVLMFRLSPELMEGSKLWLQEIFQQELTDYISGDSRDLYIRMKTSKIAVKGGHKMKVAAIIVIAASVVVIILIFLYIGKTMKLFTEETEHSLTALYHDEDDQEDLELPFLDLPTIVKATDDFSLSKKLGQGGFGAVYRGILVDGKEIAVKRLSQSSGQGLSEFKNEVILISKLQHRNLVKLLGCCIDGEEKMLIYEYMPNKSLDSFIFDNAKCKILDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNILLDSELNPKISDFGMAKTFGGDQTEGNTNRVVGTYGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGKKNREFIHSNMSLNLIGHAWRLWKEGRPLELIDSCLDDLFDLSEALRCIHIGLVCLQQHPEDRPSMSNVVVMLSSESVLPEPTEPAYIIEKKFSETDSCCKNQFSSTNEITVTMLEPR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0594 525 SMART serkin_6 209 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0594 525 ProSiteProfiles Protein kinase domain profile. 209 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0594 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Mibi01g0594 525 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Mibi01g0594 525 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Mibi01g0594 525 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Mibi01g0594 525 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 173 284 - -
Mibi01g0594 525 SUPERFAMILY Protein kinase-like (PK-like) 193 506 IPR011009 -
Mibi01g0594 525 Gene3D Phosphorylase Kinase; domain 1 171 284 - -
Mibi01g0594 525 Gene3D - 7 120 - -
Mibi01g0594 525 Pfam Domain of unknown function (DUF3403) 481 525 IPR021820 GO:0004674
Mibi01g0594 525 SUPERFAMILY EF-hand 4 91 IPR011992 -
Mibi01g0594 525 Gene3D Transferase(Phosphotransferase) domain 1 285 489 - -
Mibi01g0594 525 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 285 488 - -
Mibi01g0594 525 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Mibi01g0594 525 CDD STKc_IRAK 215 480 - -
Mibi01g0594 525 Pfam Protein tyrosine and serine/threonine kinase 210 479 IPR001245 GO:0004672|GO:0006468
Mibi01g0594 525 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 120 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0594 Mibi-ChrMibi01 5649385 5654250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0594 147 497 Receptor kinase-like Gene Family AT4G23230 54.391 5.98e-134 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0594 PK_Tyr_Ser-Thr 6.9e-50 CL0016