Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0593 ATGACACAGTCGTTTGAGGCTGACGGTAACAGCAAAAAGGTGGGGATCTTGGTGGCACTGGTGGTAACTGTTTCTGTAGCTACAATTACTGCTACACTGTTTTTGGGATGGTGTTATATTCAGAAAGGAAGCAAAATGAAGGGAGACCACAGCATTAGAAAAGATCACGAAGAGAGTCAAGCGGATGATGACATGGATCTACCATTCTTTGACCTGTTATCAATTGCCGCTGCCACTTGCGACTTTTCAACCGACAGAAAAATTGGAGAAGGTGGATTTGGACCTGTATACCAGGGAAAACTGAAAGATGGGATAGAAATTGCTGTGAAGAGGCTTTCGGCAAGCTCAGGACAAGGATTAAATGAGTTCAAGAATGAAGTAAAACTGATTGCCAAACTTCAACACCGCAATCTTGTGAGGCTCCTTGGTTGTTGCCTTCAGGGGGAAGAGAAAATGTTGGTTTACGAATACATGCCTAATGGTAGTTTGGACTCCTTTATATTTGATGATAACAAGGGTAAATTATTAGATTGGTCGAAACGTTTCCACATAATTTTGGGAATCGCAAGAGGGCTTATCTATCTTCATCAAGATTCTAGGTTAAGGATCATTCATAGAGATCTCAAAGCAAGTAATGTCTTGCTTGATAAAGAAATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGAATTTTTGGAGATCAAAATGAAGTAAATACAAAGAGAATAGTTGGTACTTATGGTTATATGGCACCAGAATATGCAACCGATGGGCTATTTTCAGTGAAATCTGATGTTTTTAGTTTTGGTGTCTTGGTGCTGGAAATCATATCCGGAAGAAGAAGCAGAGGATATTATAATCCAAATCACAGCCATAACCTCATTGGCCACGCATGGAAATTATGGAAAGAAGGGAAACCGGTAGAACTGGTTGATTCAAGTATACAAGACACATGCAATTTATCACAAATATTGCATTGTATACATGTCAGCCTCCTTTGTGTTCAACAGCATCCAGAGGATAGACCGGGAATGTCATGTGCCCTACTGATGTTCTTAAGTGAGATCGAATTGCCTGCGCCTAAACAGCCTGGTTACTTTGGGAATGCTTCTGTGGAAGCATATTCCTCTGCAGTTAAACAGGAACTGAGCTCAACAAATGAAATAACCATTACCCTATTGGAACCTCGATGA 1194 0.4028 MTQSFEADGNSKKVGILVALVVTVSVATITATLFLGWCYIQKGSKMKGDHSIRKDHEESQADDDMDLPFFDLLSIAAATCDFSTDRKIGEGGFGPVYQGKLKDGIEIAVKRLSASSGQGLNEFKNEVKLIAKLQHRNLVRLLGCCLQGEEKMLVYEYMPNGSLDSFIFDDNKGKLLDWSKRFHIILGIARGLIYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGMARIFGDQNEVNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLVLEIISGRRSRGYYNPNHSHNLIGHAWKLWKEGKPVELVDSSIQDTCNLSQILHCIHVSLLCVQQHPEDRPGMSCALLMFLSEIELPAPKQPGYFGNASVEAYSSAVKQELSSTNEITITLLEPR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0593 397 Pfam Domain of unknown function (DUF3403) 356 397 IPR021820 GO:0004674
Mibi01g0593 397 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 397 - -
Mibi01g0593 397 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 158 360 - -
Mibi01g0593 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Mibi01g0593 397 CDD STKc_IRAK 88 346 - -
Mibi01g0593 397 SMART serkin_6 82 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0593 397 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 47 157 - -
Mibi01g0593 397 Gene3D Transferase(Phosphotransferase) domain 1 158 359 - -
Mibi01g0593 397 Gene3D Phosphorylase Kinase; domain 1 55 157 - -
Mibi01g0593 397 SUPERFAMILY Protein kinase-like (PK-like) 67 367 IPR011009 -
Mibi01g0593 397 ProSiteProfiles Protein kinase domain profile. 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0593 397 Pfam Protein tyrosine and serine/threonine kinase 84 346 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0593 Mibi-ChrMibi01 5636266 5639693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0593 16 366 Receptor kinase-like Gene Family AT4G23230 54.342 1.04e-134 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0593 PK_Tyr_Ser-Thr 3.9e-52 CL0016