Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0588 ATGGACCTTCTTGCTTGCTTCACTGTTTTCGTTTCTGTCCTTCTTCCCATCCTCCACCCTTCCCTTGCTCTTGATTCCCTTAGCCAATCGCAGTTCATCAGGGACAATGGAACCACCTTGGTTTCAAAAGATGGAACCTTTGAGCTCGGTTTCTTCTCTCCTGGTACTTCCACCAAACGCTACCTCGGTATTTGGTACAAGAACATCCCTGTTCAAACCGTTGTCTGGGTCGCTAATCGCCTCAACCCCATCAACGATTCTTCTGTTACCTTAACTTTGATCCCTTCTGGTATTCTTGTCCTCTCCCAAAACAACTCTCCTCTCTGGTCAACAAATGCCACCGCAAAACCGCAGAGTCCAATCGCCCGCCTCTTCGATTCTGGAAATCTTGTGGTGATAGATGAGAACGAAGCTGACCCAGATGCTTATTTATGGCAGAGCTTTGACTATCCCTCTGATACGTTATTACCAGGTATGAAATATGGGTGGGACTTAAAAACTGGTAGGCAATGGAATTTAACAGCTTGGAAGAGTCCAGATGATCCATCGCCTGGAGAATTAACTAGTGCTGTGGTGCTCTATAACTATCCTGATTCCTTTATAATGAAGGGAACCAGAAAGTTTTACCGATTTGGACCTTGGAATGGAGTTCGTGGGAGTGGTGGTCCTGAAATAAAGCCCAACCCTGTTTTTGATTACACCTTTGTTGACAATAAGGATGGATATTACTACATGGACCTTATCAATAATAATTCTGGGTTGACAAGATTGGTGTTGAACGAAACAGCCTCTGCTCGCTATCGTTATGTATGGCTGGAAAATATCAAGACATGGCAGATTTATTCGACGAAGCCAATAGATTACTGTGATACTTATGGTCTTTGTGGACCCAATGGGAATTGTATCATTAGTGAATCCCCTGTATGCCGATGCTTAAAAGGTTTCACTCCTAAGTCACCACAAGATTGGAATTCGGTGGATTGGACTGGAGGATGTGTGAGAAATAAACCTCTGAACTGCTCTGAGAAATACAAGGATGGGTTCATTAAATTGACGGGCATGAAGGTGCCTGACACTACTCTGTCTTGGCTTGACGAGACAATGAATCTTGAGCAATGCAGACGAAAGTGCTTGGAGAATTGTTCTTGCACGGCTTATACTAATTCAGATATCAGAGGGGGAGGTAGTGGTTGTGCCTTATGGTTTGGTGATCTAGTTGATGTGAGATATTATGCTTCTGGGGGGCAAGATCTGTATGTTCGAATGGAAGCTTCAGAATTAGAATCTGACCATAAAAAGGAGGTGATACTGATCGTTACTGTTACAGTTGGTGCAATTTTGGTTATGCTTTTTGTTGGAGGCTGTATCTTTTACAGAATTCGCAGAAACCAGAAAGCCGACACAGAAGATGTAAAAGATGATATTCAATATAATGAGAGTCCACAGGATGATCTAGATCTTCCCTTGTTTGATCTTGCCACAATAGTAGATGCCACTAACAACTTCTCCAGGAAGAACAAAGTCGGAGAGGGAGGATTTGGACCTGTATATTGGGGAAAATTATTGAATGGGCAAGAAATTGCAGTGAAGAGGCTTTCAATAAAATCAAGACAAGGATTGGTGGAGTTTAAAAATGAAGTAAAATTTATTGCGAAACTCCAACATCGAAATTTGGTGAAACTTCTTGGCTGTTGCATCCATGGACAAGAAAAAATGCTGGTGTACGAATACATGCCCAATAGAAGTTTGAATTCCTTCATTTTTGATAAAGTCAAAGGAGAGTTGTTAGATTGGTCTAGGCGTTTCCACATTATTATGGGAATTGGTAGAGGTCTTATGTATCTTCATCAGGACTCAAGATTGAGAATTATCCATAGAGATTTAAAAGCAAGTAACATTTTACTTGATGATAAGTTCATTCCAAAAATATCGGATTTCGGGTTAGCTAAAACTTTTGAAGAAGAACAGACAGAAGGCAATACAAATAGAGTAGTGGGGACTTACGGATACATGGCACCAGAGTATGCTGCAGATGGGCTTTATTCAGTGAAATCTGACGTCTTCAGCTATGGCATATTAGTGTTAGAAATTATATGTGGGAAGAAAAATAGAGGATTTTATGTAGAAGACTCCAAGCACAACCTTATTGGTCATGCATGGATATTGTGGAATGAAGGAAGGGTTTTAGAATTGATTGATGAGAACATAGAGGAGACGTGTAATGTATCAGAAGTATTAAGGTGTATTCATGTGAGTCTTTTGTGTGTGCAACAAAATGCAGAAGATAGACCCACCATAGCTTCTGCAGTTGTGATGTTGGAAAGTGAAATCGAACTTCCTAAGCCTAAACAGCCAGGTTTCTTTCATGGAATGGGTTCAGTTCAACCACATACTTCCAACTCAAATCAGAATGAACGTAGCTCAACCAATGAAATGTCCATGACTTTACTTGAAGCCAGATGA 2463 0.4093 MDLLACFTVFVSVLLPILHPSLALDSLSQSQFIRDNGTTLVSKDGTFELGFFSPGTSTKRYLGIWYKNIPVQTVVWVANRLNPINDSSVTLTLIPSGILVLSQNNSPLWSTNATAKPQSPIARLFDSGNLVVIDENEADPDAYLWQSFDYPSDTLLPGMKYGWDLKTGRQWNLTAWKSPDDPSPGELTSAVVLYNYPDSFIMKGTRKFYRFGPWNGVRGSGGPEIKPNPVFDYTFVDNKDGYYYMDLINNNSGLTRLVLNETASARYRYVWLENIKTWQIYSTKPIDYCDTYGLCGPNGNCIISESPVCRCLKGFTPKSPQDWNSVDWTGGCVRNKPLNCSEKYKDGFIKLTGMKVPDTTLSWLDETMNLEQCRRKCLENCSCTAYTNSDIRGGGSGCALWFGDLVDVRYYASGGQDLYVRMEASELESDHKKEVILIVTVTVGAILVMLFVGGCIFYRIRRNQKADTEDVKDDIQYNESPQDDLDLPLFDLATIVDATNNFSRKNKVGEGGFGPVYWGKLLNGQEIAVKRLSIKSRQGLVEFKNEVKFIAKLQHRNLVKLLGCCIHGQEKMLVYEYMPNRSLNSFIFDKVKGELLDWSRRFHIIMGIGRGLMYLHQDSRLRIIHRDLKASNILLDDKFIPKISDFGLAKTFEEEQTEGNTNRVVGTYGYMAPEYAADGLYSVKSDVFSYGILVLEIICGKKNRGFYVEDSKHNLIGHAWILWNEGRVLELIDENIEETCNVSEVLRCIHVSLLCVQQNAEDRPTIASAVVMLESEIELPKPKQPGFFHGMGSVQPHTSNSNQNERSSTNEMSMTLLEAR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0588 820 Gene3D Transferase(Phosphotransferase) domain 1 578 783 - -
Mibi01g0588 820 SMART blect_4 31 151 IPR001480 -
Mibi01g0588 820 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Mibi01g0588 820 CDD B_lectin 36 151 IPR001480 -
Mibi01g0588 820 SMART ntp_6 343 422 IPR003609 -
Mibi01g0588 820 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Mibi01g0588 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Mibi01g0588 820 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Mibi01g0588 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Mibi01g0588 820 Gene3D - 21 148 IPR036426 -
Mibi01g0588 820 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Mibi01g0588 820 MobiDBLite consensus disorder prediction 788 820 - -
Mibi01g0588 820 Pfam D-mannose binding lectin 73 177 IPR001480 -
Mibi01g0588 820 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Mibi01g0588 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Mibi01g0588 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 577 - -
Mibi01g0588 820 MobiDBLite consensus disorder prediction 793 820 - -
Mibi01g0588 820 Gene3D Hepatocyte Growth Factor 339 419 - -
Mibi01g0588 820 Pfam Protein tyrosine and serine/threonine kinase 505 770 IPR001245 GO:0004672|GO:0006468
Mibi01g0588 820 Pfam PAN-like domain 340 408 IPR003609 -
Mibi01g0588 820 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0588 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 764 - -
Mibi01g0588 820 SUPERFAMILY Protein kinase-like (PK-like) 486 795 IPR011009 -
Mibi01g0588 820 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0588 820 Pfam Domain of unknown function (DUF3403) 777 820 IPR021820 GO:0004674
Mibi01g0588 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 422 - -
Mibi01g0588 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Mibi01g0588 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Mibi01g0588 820 CDD PAN_AP_plant 337 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0588 Mibi-ChrMibi01 5564789 5568372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0588 435 787 Receptor kinase-like Gene Family AT4G23230 54.802 3.39e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0588 PK_Tyr_Ser-Thr 2e-47 CL0016