Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0580 ATGGCTGCTTCAGAATTAGAAGCGAAATATGGACGCAGAAAGAAATTGATAATAATAGTTGCTACCACCATTGCTGCGATTTCAGGGATGCTTCTAGTTGGATGTTACTTTATTTTCAAGGTCCGCAGAAAGATGACTGATAAAGCAAAAATCAAAGAAGAAGATCAACACAGTGAAGGACCTGAAGATGATGTAGACCTCACTTTGCTGGACATGCCAACGATAGCTAATGCCACCAATAACTTTTCTCTGGAGAACATAATTGGAGAAGGTGGATTTGGAACTGTCTATAAGGGAAAATTAGTGAATGGGAAGTTAATTGCGGTAAAGAGACTCTCAAGGAGATCAGGACAGGGGTCAATAGAATTCAAGAATGAAGTGAGGCTAATTGCAAGACTTCAGCACCGAAATCTTGTGAAACTTCTTGGTTGTTGCATTCAAGGACAAGAGAAGATGCTTATTTATGAGTATATGCCAAATGGAAGCTTGAACTCCTTCATTTTTGATGAAAATCGAGGCAATTTATTGGATTGGCCTAAGCGTTTCAACATAATTTGTTGTATCGCTCGAGGTCTCATGTATCTTCATCAAGACTCTAGATTGAGAATTATTCATAGAGATCTAAAGGCGAGTAATATTTTGCTCGATGAGAAGTTGAATCCAAAGATATCAGATTTTGGCATGGCTAAAACTTTTGGTGGAGAACAAACAGAAGGCAATACAAATAGAGTAGTGGGTACTTATGGTTACATGGTACCAGAGTATGCATCAGATGGATTATTTTCAACAAAATCTGACGTCTTTAGCTTTGGTATTTTGGTAATAGAAATTATCTATGGGAAGAGAAACAGAGGGTTCTATAATGCAGACCATTCTCATAACCTTATATGTCATGCATGGTTGCTGTGGAAAGGAGGGAGGGCTTTAGAATTGATAGACAAAAACATAGAAGAGACATATGTTGTATCAGAAATAATGAGATGCATCCACATTAGTCTTCTTTGTGTACAACAACATCCTGAAGATAGACCCAACATGTCTTCTGTTGTTCTGATGTTGGGAAGTGAGAATGAATTGAATGAGCCTAAAGAGCCTGGTTTCTTTACACCACAAGCAATTTCATCAAGTCATCACATGCAATCTGGGTCCACTAATGAAATAACTTTCACCTTACTTGAAGCTCGATGA 1188 0.3796 MAASELEAKYGRRKKLIIIVATTIAAISGMLLVGCYFIFKVRRKMTDKAKIKEEDQHSEGPEDDVDLTLLDMPTIANATNNFSLENIIGEGGFGTVYKGKLVNGKLIAVKRLSRRSGQGSIEFKNEVRLIARLQHRNLVKLLGCCIQGQEKMLIYEYMPNGSLNSFIFDENRGNLLDWPKRFNIICCIARGLMYLHQDSRLRIIHRDLKASNILLDEKLNPKISDFGMAKTFGGEQTEGNTNRVVGTYGYMVPEYASDGLFSTKSDVFSFGILVIEIIYGKRNRGFYNADHSHNLICHAWLLWKGGRALELIDKNIEETYVVSEIMRCIHISLLCVQQHPEDRPNMSSVVLMLGSENELNEPKEPGFFTPQAISSSHHMQSGSTNEITFTLLEAR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0580 395 Gene3D Transferase(Phosphotransferase) domain 1 158 365 - -
Mibi01g0580 395 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 45 157 - -
Mibi01g0580 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Mibi01g0580 395 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 394 - -
Mibi01g0580 395 ProSiteProfiles Protein kinase domain profile. 82 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0580 395 CDD STKc_IRAK 88 353 - -
Mibi01g0580 395 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 158 361 - -
Mibi01g0580 395 Pfam Protein tyrosine and serine/threonine kinase 84 351 IPR001245 GO:0004672|GO:0006468
Mibi01g0580 395 SUPERFAMILY Protein kinase-like (PK-like) 67 375 IPR011009 -
Mibi01g0580 395 ProSitePatterns Protein kinases ATP-binding region signature. 88 110 IPR017441 GO:0005524
Mibi01g0580 395 SMART serkin_6 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0580 395 Gene3D Phosphorylase Kinase; domain 1 40 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0580 Mibi-ChrMibi01 5498280 5500101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0580 16 368 Receptor kinase-like Gene Family AT4G23190 52.941 4.85e-130 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g0580 PK_Tyr_Ser-Thr 3.5e-49 CL0016